Gene Information

Name : P700755_003406 (P700755_003406)
Accession : YP_006868792.1
Strain : Psychroflexus torquis ATCC 700755
Genome accession: NC_018721
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-glucosamine 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3603078 - 3604064 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence : 
ATGATGTACAAAACAGAATACCATACACAAGATTTATCTAAGTTTCGATTTTTAGTGACTGGGGGAGCTGGATTTATAGG
TTCTAATATCGTTGAATACCTATTGAAATTTGGAGCAAAACACGTCCGAGTTTTAGACAATTTATCTAATGGCTACAGAA
CCAACATCAAAGAATTTGAATCAGAATCTAACTTTGAATTTTTAGAAGGTGATATCAGAAAAATTGAGGATTGTGAGCAA
GCTGTTGAAGATATCGATATAGTTCTTCATCAAGCTGCTTTAGGATCTGTACCGAGATCTATAGATGATCCCATTTTAAG
TAACTCTGTGAATGTCTCTGGATTTTTAAATATGCTGGTCGCTTGTAAAAATTCTAAAACTGTAAAACGTTTTGTTTATG
CGGCTTCAAGCTCAACTTACGGCGATAGTCCTACTTTACCCAAAGTTGAAAACACTATAGGTAAGCCTTTGTCCCCTTAT
GCTGTGACCAAATATGTCAATGAACTATATGCCGATGTGTTTGCTAAAACCTACGGACTTGAAGTTATTGGCCTCCGGTA
TTTCAACGTTTTCGGACCTAAACAAAGTCCAGAAGGCGCCTATGCTGCTGTCATTCCTTTATTTATGCAATCGTTAAAAG
ACCAAAATTCACCAACCATGAACGGTGATGGTGAGCAAACCAGAGATTTTACGTTTGTAGAAAATGCAGTACAAGCCAAC
ATAAAAGCCTCCTTTGCAGATAAGAAAGCAACCAATGAAGTTTACAATGTAGCTTGTGGCGACCGCATCAGCTTAAATCT
GCTTTGGTCGGCTTTAGAAAAAGCGTCTGGTAGTTCTTTAAAAGCAATCTATGGTCCACCAAGACAAGGCGATGTAAAAG
ATTCTTTAGCTGATATAAATAAAGCAAAAGAATTAATAGGATATGAGCCTAAATTTAATGTAGAAGAAGGACTAAAAATA
ACGTGGGACCACTTCAACAAGGACTAA

Protein sequence : 
MMYKTEYHTQDLSKFRFLVTGGAGFIGSNIVEYLLKFGAKHVRVLDNLSNGYRTNIKEFESESNFEFLEGDIRKIEDCEQ
AVEDIDIVLHQAALGSVPRSIDDPILSNSVNVSGFLNMLVACKNSKTVKRFVYAASSSTYGDSPTLPKVENTIGKPLSPY
AVTKYVNELYADVFAKTYGLEVIGLRYFNVFGPKQSPEGAYAAVIPLFMQSLKDQNSPTMNGDGEQTRDFTFVENAVQAN
IKASFADKKATNEVYNVACGDRISLNLLWSALEKASGSSLKAIYGPPRQGDVKDSLADINKAKELIGYEPKFNVEEGLKI
TWDHFNKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-66 53
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-66 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P700755_003406 YP_006868792.1 UDP-N-acetyl-D-glucosamine 4-epimerase VFG0430 Protein 9e-67 53