Gene Information

Name : P700755_002382 (P700755_002382)
Accession : YP_006867908.1
Strain : Psychroflexus torquis ATCC 700755
Genome accession: NC_018721
Putative virulence/resistance : Virulence
Product : retron-type reverse transcriptase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2568911 - 2570164 bp
Length : 1254 bp
Strand : +
Note : -

DNA sequence :
ATGATTTTTAAAGAACAAACAAAGTCGATCCCCATAACCAAGGAGATGGTGTGGGAATCCTACAAGAAGGTAAAAAGTAA
CAGAGGAAGTGCTGGAATAGACCAACAAACTCTATCGGAATTCGATAGAGTACGTTCCAAGGAACTGTACAAAGTTTGGA
ACAGACTAGCATCAGGAAGTTATTTTGCATCTGCGGTAAAGCGGGTTAATATCCCCAAGGCAGGGGGTAAAACCCGACCT
TTGGGTATTCCCACTGTAAGCGATAGGATAGCACAACAAGTAGTTAAGCAGTACCTTGAACCTAGATTGGAATCCATATT
TTCTAAAAACTCTTATGGATACCGTCCGAACAGGAGTGCACATACAGCTATTGAAATTGTACGTCTAAACGTACTGCGAT
ATAGTTGGGTGATAGATTTAGACATACAAGAATTCTTTGAGAATGTTGACCATAGCCTTCTGTTGAAAGCTTTGGAACGT
CATGTTTCAGAGAAGTGGGTGTTGCTCTACATCAAACGGTGGCTGGAAGCTCCAGTAATACTAGAAGATGGAACGGTTAA
AATATCCACTGGCAAAGGGACACCTCAAGGAGGGGTGATCAGTCCACTGTTGTCTAATCTATATATGCATTACTGTGTGG
ATAAATGGTTAGAGAAATACTATCCACAGGTAAAGATGGTGCGTTATGCAGATGACTTGATTGTCCATTGTAGAAGCTAT
GAGGAATCTGTTCATACACTTGCAGTTCTAAAAGAACGTCTAACAGAGTGCGGTTTAACTGCGCATCCTGAAAAGACCAA
AATAGTGTACTGCAAGAAGGATGGCAGATACCTCAAAGGGTATCCTGTGCAATTTGATTTCTTAGGATTCAGCTTTCAAC
CGATAAGGTTCAAATTGAAAAAGGGCGGAAGCTTCCTTCAGTTTGATTGTAAAATGAGCAGAAAGTCCAAAGTTCGAATC
ACAGGAGAACTCCGTAAACTTGCTTTCCATAACAAAACTCAACGTGGGATACAGGATTTGGCAAATCTGCTGAACCCTAA
GCTTCGTGGTTGGATTCAGTATTATGGAAAGGTAAGTCGAAGGAGCCTACAGCCTGTGTTTTATTACCTACATAATCGTA
TGATCAGGTGGATATTGAACAAGTATAAACGCTTCAAAGGAAGCAAAATCAAAGCTGTAAAATGGCTTAGGTTTATTACA
AAGTCTTATCCAAATTTGTTCTATCATTGGGAATTGGGGTACAAACTGGTCTAA

Protein sequence :
MIFKEQTKSIPITKEMVWESYKKVKSNRGSAGIDQQTLSEFDRVRSKELYKVWNRLASGSYFASAVKRVNIPKAGGKTRP
LGIPTVSDRIAQQVVKQYLEPRLESIFSKNSYGYRPNRSAHTAIEIVRLNVLRYSWVIDLDIQEFFENVDHSLLLKALER
HVSEKWVLLYIKRWLEAPVILEDGTVKISTGKGTPQGGVISPLLSNLYMHYCVDKWLEKYYPQVKMVRYADDLIVHCRSY
EESVHTLAVLKERLTECGLTAHPEKTKIVYCKKDGRYLKGYPVQFDFLGFSFQPIRFKLKKGGSFLQFDCKMSRKSKVRI
TGELRKLAFHNKTQRGIQDLANLLNPKLRGWIQYYGKVSRRSLQPVFYYLHNRMIRWILNKYKRFKGSKIKAVKWLRFIT
KSYPNLFYHWELGYKLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 2e-92 46
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 6e-78 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P700755_002382 YP_006867908.1 retron-type reverse transcriptase VFG1512 Protein 3e-78 43