Gene Information

Name : P700755_001480 (P700755_001480)
Accession : YP_006867125.1
Strain : Psychroflexus torquis ATCC 700755
Genome accession: NC_018721
Putative virulence/resistance : Virulence
Product : retron-type reverse transcriptase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1556654 - 1557916 bp
Length : 1263 bp
Strand : -
Note : -

DNA sequence :
ATGAATTTATGGAATGAAACAAAATCAATACCGATAAGTCGCCTAATGGTTTGGGAGGCTTATCAAAAAGTGCGTTCCAA
CAAAGGAAGTGCGGGAATAGATGCTATTGGTATGCAAGAATTTGATGCCAACCGCAGTAAACACCTTTACAAACTTTGGA
ATCGGATGGCATCAGGGAGTTATTTCCCCCCACCTGTCAAAGAAGTAGAGATATCAAAGAAAGACGGTACAATCCGTAAA
TTGGGTATACCCACTATTAGTGACAGAGTAGGGCAAATGGTGGTTAAAATGTTTTTTGAACCAAGATTAGAGTTAGTATT
CAGTCCAAATTCTTACGGCTATCGACCAAAGAGAAGTGCTCATCAAGCATTATCAAGGGTAAGAGAGAACTGTTGGAAGA
AAAACTGGGTAATTGACTTAGACATCAAAGGTTTCTTTGACAATATAGACCATAACAAACTGATGCTTGCAGTAGAGAAA
CATGTACCTGAAAATTGGGTTAAACTCTACATCACACGATGGCTGGAAGCACCCGTTGTTACAAAGTCTGGAAAACTGAC
CCAAAGGAAAGGAAAAGGAACGCCACAAGGCGGAGTAATCAGTCCCTTACTGGCAAATCTTTTTCTGCATTACGCTTTTG
ATACATGGTTGGAAAAGGTAGACAAAAATGTAGTTTTCACTCGTTATGCCGATGATGTGATATTACACTGTAATACAAAA
GCTCATGCGGAACAAATACTGCAATTAGTACATCAAAGAATGGAATCGGTAGGATTAGAATTACATCCTAAAAAGACAAA
AATTGTCTATTGCCGAGATTACAGAAGAAAAGAAAATCACCCAATGGTCAGATTTGATTTTTTGGGATACTCTTTTCAAC
CAAGAACAGCTTATTCTAAGAAAAAGAGAAAGCTATTTTTAGGTTATGATTGTGCTATAAGTATTAGTTCAAGAAAACGA
ATCGCAGACAAGCTCGAAGAACTCAAGGTAAATAAACTTACGTTTAAAAGCATTGTAGGAGTGGCACAATACCTTAATCC
AATGATTAGGGGATGGGTGCGTTACTATGGTAAATTTAAGATGTATGAACTTACAAAAGTCTTTCGATTACTAAGTAAAC
GATTAGTTTGGTGGGCAAGGAAAAGGTATAAGCGTTATAAAACCAGTATTAGGAAAGGGTACAAATGGTTGGCAACGGTA
AGAAAGCAATTTCCTACTTTGTTTTACCATTGGAACTTTTCTCAGATAAACATTATCGCTTAG

Protein sequence :
MNLWNETKSIPISRLMVWEAYQKVRSNKGSAGIDAIGMQEFDANRSKHLYKLWNRMASGSYFPPPVKEVEISKKDGTIRK
LGIPTISDRVGQMVVKMFFEPRLELVFSPNSYGYRPKRSAHQALSRVRENCWKKNWVIDLDIKGFFDNIDHNKLMLAVEK
HVPENWVKLYITRWLEAPVVTKSGKLTQRKGKGTPQGGVISPLLANLFLHYAFDTWLEKVDKNVVFTRYADDVILHCNTK
AHAEQILQLVHQRMESVGLELHPKKTKIVYCRDYRRKENHPMVRFDFLGYSFQPRTAYSKKKRKLFLGYDCAISISSRKR
IADKLEELKVNKLTFKSIVGVAQYLNPMIRGWVRYYGKFKMYELTKVFRLLSKRLVWWARKRYKRYKTSIRKGYKWLATV
RKQFPTLFYHWNFSQINIIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 9e-100 47
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 2e-79 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P700755_001480 YP_006867125.1 retron-type reverse transcriptase VFG1512 Protein 1e-79 41