Gene Information

Name : BAST_1688 (BAST_1688)
Accession : YP_006865821.1
Strain : Bifidobacterium asteroides PRL2011
Genome accession: NC_018720
Putative virulence/resistance : Virulence
Product : type-1 restriction system, restriction subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.21.3
Position : 2152104 - 2155121 bp
Length : 3018 bp
Strand : +
Note : -

DNA sequence :
ATGGCCTTTACAGATAGAACGGAGAGAGGCTTTGAGACCCTCATCGTAAACTGGCTCGTAAATCAGAACGGTTACGAGCA
GGGGACGAATGACGACTACAGCAAGGAATACGCAGTCGACGAGACCCGACTCTTCCATTTTCTGAACGATACACAGCCGC
AAGAAACGGCAAAGCTCGGTATTAACAGCAGTGCCGCAAAGAAGCGGCAGTTCCTGAACAGACTTTCCGCAGAGATCACA
AAACGCGGCATCATCGATGTGCTGCGTAATGGCCTGCACGTGTATCCGGCAGACCTTATCATGTTCTGTTTCACGCCGAC
TGAGAACAACGAGAGGTCGAAGGAGATGTTCGAGAAGAACATCTTCAGTGTGACACGGCAGCTACGCTATTCATCGGACA
CGACGAAGCTTGCGCTCGACCTGTGCCTGTTCATCAACGGCCTGCCGATTATCACGATAGAACTGAAGAATCACTTCACT
GGGCAAACAACAACGGACGCTGTTGAACAGTATAAAAAAGACCGCAGTCCGCGCGATACACTTTTCTCGTTCAAACGGTG
TATGGTGCATTTTGCGGTGGATGACCAGACATTGATGTTCTGCACGAAGCTAGCCGAAAAGGATAGTTGGTTCCTACCAT
TCAACAAGGGTTACAACGACGGAGCCGGAAATCCGCCAAACCCGGATGGCATCATGACAGACTACCTGTGGAAGGACATC
CTCACCAAGCAAAAACTCTCTAGGATCATCGAGAACTATGCACAGGTAGTAGTTGATGAAGATCCGGACACGCATAAGAA
GTCCGAAAAGCAGATTTGGCCGCGCTATCATCAGCTGGATTGCGTTGAGAAACTTCTTACCGATGTGAAAGAAAATGGTG
TCGGTAAGAGGTATCTCATTCAGCACAGCGCGGGTTCGGGAAAGTCAAATTCCATCGCATGGCTTGCTCATCAGCTGATT
GGATTGGAGAAGGATGGCCGCCCGATGATCGACTCGGTCATAGTAGTGACCGACCGCCGTATTCTCGACAGGCAGATCCG
CGATACCATCAGGCAGTTTATGCAGGTGAGGAACACCGTCGTGTGGGCACAGCATTCCGGAGATCTGAAGAAGGCTATCC
AGGACGGCAAGAGAATCATTGTCACAACGATCGAGAAATTCCCGTACATCTCGCAAGAGATCGGACAAGAGCACCTAGAC
AACAGGTTCGCTATCATCATAGATGAGGCGCATTCTGGTCAAAGCGGAAGAAATTCTGCAAATATGAATCTCGCGCTTTC
CGGAATGGCGTCCGACGACGAAATGGACAATGAGGACAAGATTAACGCTATCGTCGAAGGTCGGAAGCTCGTGAAGACAG
CTAGCTACTTCGCTTTCACCGCCACGCCGAAGAACAAGACCGAGGAGGTCTTCGGAACCCCGTATGAAGCGGACGGAGTT
GTCAAGCACAAGCCGTTTCATGTATACACAATGAAGCAGGCGATCCAGGAAGGTTTCATTCTCGATGTCCTGAAGAACTA
TACAACCATCGACAGCTGGTACAAGATCGCCAAAAAGGTAGAGGATGATCCTATGTTCGACAAGAAGCGCACCCAGAAGA
AGCTGCGCTCCTTCGTCGAAGGCAACTCGGATGTTATCGCCCAGAAAGCGGCAATGATGGTGGATCACTTCCATGAGCAG
ATCATCGCCAAGAAAAAGCTGAATGGTAGGTCGCGCGCCATGGTCGTAACGGCGAGCATACCGCGCTGCATCGAGACCTA
CCAAGCCATCAACAAATGCCTTGCCGAACGGCACAGCCCCTACAAGGCGATAATCGCGTTCTCCGGCGAATACAGGTACA
ATGGTCAGAAGCTAGCCTTAACTTCAGCGGATATAAACGGATTTCCCGATGCCAGGATACCGAAGGAGTTTACGAAGGAT
CCGTACAGGCTCCTTGTTGTCGCGGACATGTTCCAGACGGGGTTCGACGAGCCGCTGCTGCAGACTATGTACGTGGACAA
ACCTCTCTATGACATTGCGGCGGTGCAGACTCTTTCCCGCCTGAACCGTGCCGCACCTGGAAAGAGCGAAGTATACGTCC
TCGATTTCGCTAACAAGACGCAGACCATTCAGGATGCGTTCTCAAAATTCTACAGAACGACGATTCTGTCAGGGGAGACA
GATCCGAATAAGCTCTACGATCTGATAACCATCATGGAAAATTATCAGGTGTATGGCAGTAATGACGTAAAAAGTGTCGT
CTATCTGTTCATTGGTGGAGCGGAAAGAGACAGGCTTGATCCGTTGCTTGACCCTTGTGTCATCACATACGAGGATCTTG
GAATGGATGATCAGATAAAGTTCAAGAGCGCAGCGAAATCATTCGTGCGCACTTACGGGTTCCTCAGCTCCATCCTGCCC
TACGGAAACTTGGACTGGGAGAAGTTGTCCATCTTCCTTAACCTCCTGATCCCGAAGCTTCCATCTCCCCGTGAAGACGA
TCTGTCTGTAGAGATCTCATCCACGATTGACCTTGACAGTTACCGTAACGAGGCACTAGAGGCAGTTGCCATCAAGCTCG
AAGACGAGAACGCGGAAATTGCACCGGTCCCGGCTGGTAAAGCCGGTCATATCGTTGAGCCAGAGATGGATCCGCTATCT
CAGATCATCTCGGAATTCAATGATCTGTTCGGCAACATCCACTGGAAGGATGCGGATAACGTTCAAAAACAGCTTCTGCG
GATTCCGACCATGGTGTCACGCGACGAGAAGTACCAGAACGCTATGCGCAATTCAGATGAGCAGGAGGCCAGGACTGAAA
GCGAACGCTCCCTACAGAAGGTTATCTTCTCTATCATGTCGGACAACATGGAGTTATTCAAACAATTCCAGGACAATCCG
TCATTTAAAAGATGGTTGAACAGCATGGTGTTCAATCTAACTTACAACAAGGAGGGAAAACCATATAAGGCCCCAGACGA
TGCTTCTCAAATGAACACGGCCAAGCAACGAGATACGGACGTTCCCAGAGAACAGTAA

Protein sequence :
MAFTDRTERGFETLIVNWLVNQNGYEQGTNDDYSKEYAVDETRLFHFLNDTQPQETAKLGINSSAAKKRQFLNRLSAEIT
KRGIIDVLRNGLHVYPADLIMFCFTPTENNERSKEMFEKNIFSVTRQLRYSSDTTKLALDLCLFINGLPIITIELKNHFT
GQTTTDAVEQYKKDRSPRDTLFSFKRCMVHFAVDDQTLMFCTKLAEKDSWFLPFNKGYNDGAGNPPNPDGIMTDYLWKDI
LTKQKLSRIIENYAQVVVDEDPDTHKKSEKQIWPRYHQLDCVEKLLTDVKENGVGKRYLIQHSAGSGKSNSIAWLAHQLI
GLEKDGRPMIDSVIVVTDRRILDRQIRDTIRQFMQVRNTVVWAQHSGDLKKAIQDGKRIIVTTIEKFPYISQEIGQEHLD
NRFAIIIDEAHSGQSGRNSANMNLALSGMASDDEMDNEDKINAIVEGRKLVKTASYFAFTATPKNKTEEVFGTPYEADGV
VKHKPFHVYTMKQAIQEGFILDVLKNYTTIDSWYKIAKKVEDDPMFDKKRTQKKLRSFVEGNSDVIAQKAAMMVDHFHEQ
IIAKKKLNGRSRAMVVTASIPRCIETYQAINKCLAERHSPYKAIIAFSGEYRYNGQKLALTSADINGFPDARIPKEFTKD
PYRLLVVADMFQTGFDEPLLQTMYVDKPLYDIAAVQTLSRLNRAAPGKSEVYVLDFANKTQTIQDAFSKFYRTTILSGET
DPNKLYDLITIMENYQVYGSNDVKSVVYLFIGGAERDRLDPLLDPCVITYEDLGMDDQIKFKSAAKSFVRTYGFLSSILP
YGNLDWEKLSIFLNLLIPKLPSPREDDLSVEISSTIDLDSYRNEALEAVAIKLEDENAEIAPVPAGKAGHIVEPEMDPLS
QIISEFNDLFGNIHWKDADNVQKQLLRIPTMVSRDEKYQNAMRNSDEQEARTESERSLQKVIFSIMSDNMELFKQFQDNP
SFKRWLNSMVFNLTYNKEGKPYKAPDDASQMNTAKQRDTDVPREQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 8e-166 42
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 8e-166 42
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 6e-165 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAST_1688 YP_006865821.1 type-1 restriction system, restriction subunit VFG1098 Protein 4e-166 42