Gene Information

Name : BAST_1593 (BAST_1593)
Accession : YP_006865728.1
Strain : Bifidobacterium asteroides PRL2011
Genome accession: NC_018720
Putative virulence/resistance : Virulence
Product : ABC transporter, ATP binding protein, probably Coelichelin uptake porter (Iron Chelate Uptake)
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 2028241 - 2029140 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence : 
ATGACGTCACCCCCGTCAGTCGACTCCTGGAGCAGCGCACACAGGCTGTCCGCCTCGCACCTGCGCCTCACCTATGGCGG
GCATACGGTCATCGAGGATCTGAGTCTGGATATACCCCCACACACGATGGGGTCCATCATCGGACCCAACGGGTGCGGAA
AATCAACCTTCCTCAAAGCCCTGGCCAGGATTTTGAAACCGGCCTCGGGGACCGTCATGCTGGACGGAGAACCCATCACC
AGCATGCCCACCCGCAAGGTTGCGACGATTCTGGGGCTGCTGCCGCAGAACCCGTCAGCCCCCGCCGGCATCACCATCGC
CGACCTGGTCGCTCGCGGCCGATACCCTCACCACCGCTTCGTCGAACGGTGGACCACCAAGGATGAAAAAGCGGTGGAGC
GGGCTCTCTCCCTGACCGGACTGACCAACATTGCGGGGTGTCCAATCGACCGCCTGTCCGGAGGCCAGCGCCAGCGCGCC
TGGATCGCCCTGACCCTGGCCCAGGAGACCGACATACTCCTGCTCGACGAGCCGACCACTTACCTGGACATCGCCTACCA
ACTGGAGGTCCTTGACCTGCTGGGCACCCTGAACAGGCAGGAGGGCGTGACGGTGGTCATGGTTCTCCACGACCTGAACA
TGGCCGCCAGATACTCGGATTGGATCCTGGCCATCAAGGATGGCCGGATGGCCGCCCTGGGCGCTCCCGACGAGGTCATG
ACCGAGAACCTGGTCAGAGAGGTATTCGACATCGCATCCACCGTGGCGAAGGACGAATCCACCGGCGCCCCGATGATGAC
CCCGGCGCCCCTCCATAGCCTTGAAGCCCACTCTGGCGGGGCTCGTAATGTACACGTACACTGGGATGACTCGGCAGGAC
GACACCAGACAATCCGATGA

Protein sequence : 
MTSPPSVDSWSSAHRLSASHLRLTYGGHTVIEDLSLDIPPHTMGSIIGPNGCGKSTFLKALARILKPASGTVMLDGEPIT
SMPTRKVATILGLLPQNPSAPAGITIADLVARGRYPHHRFVERWTTKDEKAVERALSLTGLTNIAGCPIDRLSGGQRQRA
WIALTLAQETDILLLDEPTTYLDIAYQLEVLDLLGTLNRQEGVTVVMVLHDLNMAARYSDWILAIKDGRMAALGAPDEVM
TENLVREVFDIASTVAKDESTGAPMMTPAPLHSLEAHSGGARNVHVHWDDSAGRHQTIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-63 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-53 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-53 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-53 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-53 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-48 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-44 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-60 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-60 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAST_1593 YP_006865728.1 ABC transporter, ATP binding protein, probably Coelichelin uptake porter (Iron Chelate Uptake) BAC0164 Protein 2e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAST_1593 YP_006865728.1 ABC transporter, ATP binding protein, probably Coelichelin uptake porter (Iron Chelate Uptake) VFG0925 Protein 3e-61 50
BAST_1593 YP_006865728.1 ABC transporter, ATP binding protein, probably Coelichelin uptake porter (Iron Chelate Uptake) VFG1042 Protein 1e-48 45