|
Name : BAST_1084 (BAST_1084) Accession : YP_006865228.1 Strain : Bifidobacterium asteroides PRL2011 Genome accession: NC_018720 Putative virulence/resistance : Virulence Product : transporter, probably Type VI secretion system, EvpA-P Function : - COG functional category : - COG ID : - EC number : - Position : 1419687 - 1422335 bp Length : 2649 bp Strand : - Note : - DNA sequence : ATGTTCGAACGGTTTACCGACCGTGCGCGGCGGGTGATTGTGCTGGCGCAGGAAGAGGCCCGCACCCTGCAGCACAATTA CATCGGCACCGAGCACCTCCTCCTGGGCCTGATCAGGGAGGGTGACGGTGTCGCCGCCAAGGCCCAGGCCTCCAAGGGCG TGGAGCTGGATGCCACCCGCAAACAGGTCGAGGAGATGATCGGTAAGGGCAATGCGGTCCCCAATGGGCACATCCCATTC ACACCGCACGCCCGTCAGGTCCTGGAGCTGTCGCTGCGCGAGGCCCTTCAGCTTGGCCACTCTTACATCGGCACCGAGCA CATTCTGCTGGGTCTCATCCGCGAGGGTGAAGGCGTCGGTACCCAGGTGCTGATCAAGATGGGTGTGGATCTGGGCGATC TGCGGACCGCCACCATTGACATGATTCGCGGCAGCCACGAAGGCGGCGATGCCGGCAAGGGCGATCTGGCCAATGCCGGC GGCGTTTCCAACAAGGGTGGACAGACCGGTTCGGCCATTCTGGACCAGTTTGGCAGGAACCTGACCCAGGAAGCCGCTGA AGGCAAGCTGGATCCGGTCATCGGCCGGGCCAATGAAATCGAGAGGGTCATGGTCGTCCTGTCCAGGAGGACCAAGAACA ACCCGGTGCTGATCGGAGAGCCCGGCGTAGGCAAGACAGCCGTGGTCGAGGGCCTGGCCCAGAAAATCCATAACGGTGAT GTTCCTGAGACCCTCAAGGGCAAGCAGGTCTACTCGCTGGATCTGGGCTCCATGGTGGCCGGTTCCCGCTATCGGGGCGA CTTCGAGGAGCGTCTGAAGAAGGTGCTCAAGGAGATAAAGACCCGGGGCGACATCATTCTCTTCATCGATGAGATTCACA CCATCGTCGGCGCAGGTTCGGCAGATGGGGCCCTGGGTGCCTCTGACATGCTCAAGCCCCTGCTGGCCCGCGGCGAGCTG CAGACCATCGGAGCGACCACCACCGACGAGTACCGCAAGTACATCGAGAAGGATGCGGCCCTGGAGCGGCGCTTCCAGCC CATTCAGGTCTCCGAGCCGACCATCGCCCAGACTATCGAGATTCTCAAGGGTCTGCGTGGCCGCTACGAGCATCATCACC ACGTCACTATCACCGACAAGGCCCTGCAGTCGGCGGCTGAGCTCTCTGCACGCTACATCCAGGACAGGAACCTGCCTGAC AAGGCTATCGACCTGATCGATGAGGCTGGCGCACGTCTGCGCATCAAGCGGCTGACCGCCCCGCCGGAGCTCAAGGAGCT GGACACCAAGGTGGATCGCATTTCCGCCCAGAAGGACCAGGCCATCAAGGATCAGGACTTCGAGAAGGCCGCTCAGCTGC GCGACAGCCAGGAGAAGCTGGAGGCCGAGCGCAAGGAGAAGGAGAAGGCCTGGCACGAGGGCGAGTCCGACGTCAAGATG GTCGTCGACGAGGACGTGATCGCTGAGGTGGTCTCCTCGACCACCGGCATTCCGGTCTTCAAGCTGACCCAGGCCGAGTC CAAGAAGCTCCTGGGTATGGAGAAGGAGTTGCACAAGCGGATCATCGGCCAGGATGAGGCCGTCTCCGCCCTGTCCCGCT CAATCCGGCGCACCCGTGTGGGCCTCAAGGACCCCAAGCGCCCTGCAGGTTCCTTCATCTTCGCCGGCCCCACTGGCGTG GGCAAGACCGAGCTGGCCAAGGCTCTGGCCCAGTTCCTCTTTGACGACGAGGATGCCCTGATCAGAGTGGATATGTCCGA GTTTTCGGAGAAGTACTCCACATCTCGTCTCTTCGGTGCCCCTCCGGGGTACGTGGGATACGAAGAGGGCGGCGAGCTGA CCGAGAAGGTCAGGCGTAAGCCATTCTCCGTGGTTCTCTTCGACGAGATCGAGAAGGCTCACCCGGACATCTTCAACACC CTTCTGCAGGTGCTGGACGACGGCCATCTGACCGACGGGCAAGGTCGCATGGTGGACTTCAAGAACACCATCATCATCCT GACCACCAACCTGGGAACCCGTGACATCGCCAAGGCGGCAAACACCGGCTTCAACGTGAGCGGCAACACCGAGACCTCCT ATCAGCGGATGAAGGACCAGGTGACCAGTGAGCTCAAGCAGCAGTTCAGGCCCGAGTTCCTGAACCGCCTGGATGACATC ATCGTCTTCCAGCAGCTGACCGAGCCCCAGGTCCGGCAGATCGTCGATCTGGACATCGCTCAGCTCAACGACCGTCTCTT CGAGCGCCACATGTCCCTGGATCTGACCGACAAGGCCAAGGATCTGCTGGCCGAGAAGGGCTTCGATCCGCTCCTGGGTG CCCGGCCCCTGCGCCGTGTCATCCAGCGGGATATCGAGGATGCCGTCTCCGAGAAGATCCTCATGGGCGACCTTACGGAC AATGAGTCCGTCCAGGTCGATGCCGAAGGCGAGGGCATCCTGGGTGAGTTCACCTTCACAGGAAAGCCCTTCGAGGGACC CCGGCATGCGGCCAGCTCCGCTGATAAACAGGACCAGAAGTCTGAACTGGTCGGAGCTTCGGTGAGCTCTTCCGACGCTG ATGTTCCGCCAGCAGGCGAGGCCGACAGCCAGAGCCAGGATGGTCAAGGTTCTGAGCAGTCCGCTCAGAGTTCGCCTGCC AGTGACTGA Protein sequence : MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKAQASKGVELDATRKQVEEMIGKGNAVPNGHIPF TPHARQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMGVDLGDLRTATIDMIRGSHEGGDAGKGDLANAG GVSNKGGQTGSAILDQFGRNLTQEAAEGKLDPVIGRANEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIHNGD VPETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDEIHTIVGAGSADGALGASDMLKPLLARGEL QTIGATTTDEYRKYIEKDAALERRFQPIQVSEPTIAQTIEILKGLRGRYEHHHHVTITDKALQSAAELSARYIQDRNLPD KAIDLIDEAGARLRIKRLTAPPELKELDTKVDRISAQKDQAIKDQDFEKAAQLRDSQEKLEAERKEKEKAWHEGESDVKM VVDEDVIAEVVSSTTGIPVFKLTQAESKKLLGMEKELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGV GKTELAKALAQFLFDDEDALIRVDMSEFSEKYSTSRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNT LLQVLDDGHLTDGQGRMVDFKNTIIILTTNLGTRDIAKAANTGFNVSGNTETSYQRMKDQVTSELKQQFRPEFLNRLDDI IVFQQLTEPQVRQIVDLDIAQLNDRLFERHMSLDLTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDAVSEKILMGDLTD NESVQVDAEGEGILGEFTFTGKPFEGPRHAASSADKQDQKSELVGASVSSSDADVPPAGEADSQSQDGQGSEQSAQSSPA SD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BAST_1084 | YP_006865228.1 | transporter, probably Type VI secretion system, EvpA-P | VFG0079 | Protein | 0.0 | 57 |
| BAST_1084 | YP_006865228.1 | transporter, probably Type VI secretion system, EvpA-P | VFG0080 | Protein | 3e-136 | 50 |
