Gene Information

Name : ureC (Ngar_c06130)
Accession : YP_006861213.1
Strain : Candidatus Nitrososphaera gargensis enrichment culture Ga9.2
Genome accession: NC_018719
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 465842 - 467569 bp
Length : 1728 bp
Strand : +
Note : urease

DNA sequence :
ATGGTTCTCAAACTTACACGCAAGCAATACACCGACCTATTTGGTCCAACAACAGGAGATAAAGTCAGGCTCGGCGATAC
AGACCTTTTCATTCAGATAGAAAAAGATCTGATAACCCCAGGAGATGAGTGTGTCTTTGGCGGAGGCAAGACTCTCAGGG
ACGGCCTTGCACAGACCTCTGGAGTCACCAACAAGAACGGCGCTCTGGACTTTTTGATCACAAATGCAGTGATCTTGGAT
CCTGTACTGGGCATAGTAAAGGCAGACATTGGCATCAAGGACGGCAAGATTGCGGGAATAGGAAAGGCAGGAAACCCTCT
GACCATGGACAAGGTGAACCCGAACATGGTTGTTTCAGCTTGCACCGAGGCAACCGCCGGCGAACATACCATATGCACGC
CGGGCCACTTTGACACTCACATACACATGATTGCCCCTCAGCAATACATCGATGGGATCAGCAATGGCATCTGCAACATG
ATAGGCGGAGGGACTGGACCGGCAGACGGGACAAATGCTACCACATGCACACCCGGTATATACAACATAAGCAGGATGCT
GGAGGCAGTAGAAGACACCCCTGTGAACTGGGGATTCTTGGGAAAAGGAAACGATTCACACCCTTCACTGGCAACCCAGC
TGGAACAGATCGAGGCAGGAGCATGCGGGCTGAAGGACCATGAAGACTGGGGCACCACCGCGGCGGTTCTTGACGCATCC
CTAAAAGCAGCCGATATGACGGATACACAGGTGGCAATTCACACTGACTCAATCAACGAGTGTGCATATGTTGAAGATAC
AATAAACGCGATTGACGGCAGAGTGGTGCATACATACCATACAGAGGGGGCAGGTGGAGGCCACGCGCCAGACATTATGA
AGATAGCGGGCGAAACATTCGCATTGCCATCTTCTACAAACCCGACTAGGCCATACACAAAGAATACTGTAGACGAGCAC
CTAGACATGCTAATGTTCTGTCACCACCTGAACCCTGCAGTCGCAGAAGATGTCGCCTTTGCAGAATCAAGGATCAGAGC
CGAAACCATTGCGGCAGAGGACGTGCTACATGACGAGGGCGTGATCAGCATGTATTCGTCTGACAGCCAGGCAATGGGCA
GGATAGGAGAAGTCGTCATAAGGGCATGGCAGACTGCAGACAAGATGAAGAAGATGCGCGGCAAGCTGCCACAGGAGACA
GGAGATAACGACAACTTTAGAGCGAGGAGGTACATTGCAAAGACAACCATAAACTGCGCAATCACGCACGGCGTATCAGA
ACATCTTGGATCGCTTGAAGTGGGCAAGTATGCAGACATTGTGATGTATCCGATGGCATTCTTCCCGGCAAAACCTAAGA
TGGTTCTCAAAGGAGGCTTTATAGCGTGGTCCATAATGGGCGACCCCAACGCATCGCTACCCACGCCAGAGCCAGTGTAC
TACAGGCCGATGTTCGGAGCCATGGGCAAAGCAGTCCACAAGACATCCTACACGTTCATGTCCAAGCGTGCAATTGAGCT
GGGCGTTCCACAGAAACTAGGGTTGGAAAAGGTTGTCCTGCCTGTAAAGAACTGCAGGAACATCAGCAAAAAGGACATGA
TGTGGAACGATGCAACGCCAAAGATCGAGATCGATCCAGAGACTTATGAAGTAAAGCTTGACGGCAAGATTGCTACTGTA
GACCCGGCAGAAGAACTCTCGCTTGCGCAGAGATACTTCATGGCATAA

Protein sequence :
MVLKLTRKQYTDLFGPTTGDKVRLGDTDLFIQIEKDLITPGDECVFGGGKTLRDGLAQTSGVTNKNGALDFLITNAVILD
PVLGIVKADIGIKDGKIAGIGKAGNPLTMDKVNPNMVVSACTEATAGEHTICTPGHFDTHIHMIAPQQYIDGISNGICNM
IGGGTGPADGTNATTCTPGIYNISRMLEAVEDTPVNWGFLGKGNDSHPSLATQLEQIEAGACGLKDHEDWGTTAAVLDAS
LKAADMTDTQVAIHTDSINECAYVEDTINAIDGRVVHTYHTEGAGGGHAPDIMKIAGETFALPSSTNPTRPYTKNTVDEH
LDMLMFCHHLNPAVAEDVAFAESRIRAETIAAEDVLHDEGVISMYSSDSQAMGRIGEVVIRAWQTADKMKKMRGKLPQET
GDNDNFRARRYIAKTTINCAITHGVSEHLGSLEVGKYADIVMYPMAFFPAKPKMVLKGGFIAWSIMGDPNASLPTPEPVY
YRPMFGAMGKAVHKTSYTFMSKRAIELGVPQKLGLEKVVLPVKNCRNISKKDMMWNDATPKIEIDPETYEVKLDGKIATV
DPAEELSLAQRYFMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 2e-133 57
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 2e-133 57
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-129 57
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 9e-130 56
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 9e-130 56
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 9e-130 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_006861213.1 urease subunit alpha VFG0270 Protein 6e-141 57