|
Name : sdr4 (Ngar_c35180) Accession : YP_006864089.1 Strain : Candidatus Nitrososphaera gargensis enrichment culture Ga9.2 Genome accession: NC_018719 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase Sdr Function : - COG functional category : - COG ID : - EC number : 1.1.1.- Position : 2766110 - 2766859 bp Length : 750 bp Strand : - Note : similar to characterized clavaldehyde dehydrogenase of Streptomyces clavuligerus DNA sequence : ATGACAATAAAGGGCAAAGTTGCGATAATAACAGGGGCGAGCAGCGGCATAGGCTACGCCACCGCGCTTGCTTTGTCCAA GGCCGGCGCCAAGGTAGCGGCAGGCGCAAGGCGCACCGACAGGCTAGAATCCCTGCAAAGCGAGATCGCAAAGAACGGCG GCGAGGTTTTCATCCAAAGGCTGGATGTCACTAAAAAGCAAGAGTGCGATGCCTTTGTCGATGCCGTCATCAAGAAGTGG GGAACCGTGGACATTCTGATCAACAACGCCGGCCTCATGCCACTGAGCTTTTTCAAGAACCTCAAGGTTGATGAGTGGGA CCGGATGATTGATGTCAACATCAAGGGAGTGCTCTACTGCACCGCAGCTGTCATCACGCACATGATCAACAAAAAATCAG GGCACATCATCAACATTTCTTCCGTGGCCGGTAGGACGGTATTCCCTGCCGGAAGCGTCTACTGCGCGACAAAGCACGCG GTAGTGGCCTTCAGCGAAGGGCTGCGGCAAGAAGTCAGCCAAAGGGCAAACATACGAGTCACCTGCATCGAGCCGGGTGT AGTTGCGACAGAGCTTTTAAACACCATAACCGACAAGTCGCTTGAAAAGTACGTCCAGACAACTAAGCAGCAGGAGGCGC AGCAGCTGCAGTCCGAGGATATTGCAAACGCGATCCTGTTCGCCGTTCAAGCTCCAGATCATGTGAGCGTGAACGAGATA CTGATAAGGCCGACGACGCAGGAACGCTAG Protein sequence : MTIKGKVAIITGASSGIGYATALALSKAGAKVAAGARRTDRLESLQSEIAKNGGEVFIQRLDVTKKQECDAFVDAVIKKW GTVDILINNAGLMPLSFFKNLKVDEWDRMIDVNIKGVLYCTAAVITHMINKKSGHIINISSVAGRTVFPAGSVYCATKHA VVAFSEGLRQEVSQRANIRVTCIEPGVVATELLNTITDKSLEKYVQTTKQQEAQQLQSEDIANAILFAVQAPDHVSVNEI LIRPTTQER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 2e-36 | 48 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 8e-36 | 47 |
