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Name : Ngar_c29150 (Ngar_c29150) Accession : YP_006863491.1 Strain : Candidatus Nitrososphaera gargensis enrichment culture Ga9.2 Genome accession: NC_018719 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 2273829 - 2276933 bp Length : 3105 bp Strand : + Note : - DNA sequence : ATGCCAAAAGCGATAAGCGAAGCAGACGTTGAGGAAAACGTCTTGGCCATTTTAGAAAGTATGGGCTACAAAATTATCAG AGGCGACAATGAAGATTGTCTTCCCGGTGGCTCGTCAGCACTAAGGGCTGATTACAAGGATGTTGTCCTTGTCGATAGGC TCACTGACTCCCTAAGGAAAATCAACCCATCGGCTCCAATTGATGCATTAGACCAAGCAATCAAGCAAGTCCTAAGAAGC GAAAGCCAAAAGCTGATAGCAAACAATGAGAGTTTTCACAAAATGCTAGTCGATGGAATAGATATTCCAGTGCAGACACT AGAGGGAGAAACCTACAAAAAGATATGGCTCTTTGATTTTGAGGATCCAGAGAACAACGAGTTTTTGGCAGTCAACCAGT TCACAGTCGTCGAAAACAATATCGAGCGTAGACCGGATGTCATACTCTTTGTCAACGGAATACCGTTGCTGGTTATTGAA CTAAAGAACTTGGCTGACGAAAATGCCACTATATGGACAGCCTACGATCAACTTCAGACATACAAGGAACAACTTCCTTC GCTATTCAAGTATAATGAAATTCTAGTCATAAGCGACGGTATTGAAGCAAGGGCTGGAACTTTAACATCTGAACGCGAAA GATTCGCTCAATGGAAGACCATTGACGGCGGAGCGCCAAGAAAAGGATTGACTGAAATCGAAGTCCTTATCAGAGGCATG TGCAACAAGCAAAGGTTCCTAGACATAGTTAGAAACTTTATCGTCTTTGAAAAAGACAAGAGCGTTAGCAAAAAGCTGGC GGCATACCATCAGTACTGGGCTGTAAACAAGGCCTTAGAATCTACGATCAAGGCTAGGAAAGGGAATAAAAAAGCAGGCA TTGTCTGGCATACCCAAGGCTCTGGAAAGTCGCTAACCATGGTCTTTTATACTGGCAAGCTGGTAAGGGAGCTTGACAAT CCTACGGTTGTTGTTCTAACAGACAGAAATGACCTAGATGATCAGCTTTTTGGCACTTTTAGCAGATGCCAGGACATCAT ACGACAGGAGCCGCAGCAGGCCAACTCAAGAAAAGAGTTGCAAGACTTGCTCAAGGTTTCATCGGGCGGCATTGTCTTTA CCACCATACAGAAATTCTTGCCAGAGGAAGACAACAGAGAGAAGTATCCCGTATTGTCAGAAAGAGATAACATTGTTGTT ATTGCCGACGAAGCACACAGAAGCCAGTATGGCTTTGCTGCAAAAATACTGAACAAGGATGACAAGACTCTGATAACTTA TGGCTATGCAAAATACCTCAGGGACGCCTTGCCCAATGCTTCGTTCATAGGCTTTACAGGAACACCTATAGAAAAGGCAG ACAGATCGACTCCGGCTGTCTTTGGCAAGTATGTTGACACTTATGATATAGAACAGGCTGTAAATGATGGAGCCACTGTA AGAATATACTATGAAAGCAGACTTGCCAAACTAGAGCTCAAGCCTGAGGAAAGGCCGAAGATAGACAGCGAGTTTGAAGA AGTGACAGAAGGCGAAGAAGTCGAAGGCAAGGAAAAACTGAAGAGCAAATGGGCAAGGGTCGAAAAGGTAGCAGGCGCAC CAATGAGGATAAAGAGGATTGCAAAGGACATTGTCGACCACTTTGAAAAGAGGACATCTGTGCTTGAAGGAAAAGGCATG ATAGTCTGCATGTCTAGAAGAATTTGTGTTGAACTTTACAACGAGATAGTAGAGCTTCGGCCCGAATGGAAGAATAGCGA TGATGAAAAGGGAGCAATCAAAGTGGTCATGACTGGCTCTGCTTCAGACCCAAAGGAATGGCAAGAGCACATTAGAAACA AAATCCGTCGAAAGAGGATTGGAGATAACTTCAAGGACCCAAAACATGAGCTGAGGCTAATCATTGTAAGGGACATGTTT CTGACCGGCTACGACGCGCCGTCGCTTCATACAATGTATCTTGACAAACCAATGAAAGGCCATACATTGATGCAGGCCAT AGCAAGGGTTAACCGCGTCTATCCGGGAAAAGAGGGTGGACTAATTGTTGATTACATGGGGGTTGGAGCAGAATTAAAGA AAGCATTGATGGACTATACTGCCAGTGGTGGCAAGGGCAAGCCGGCCTTTGACCAAGAAAAGGCGGTAATGATGATGGTT GAAAAATACGAAGTTGTAAAAGACATGTTCCACGGCTTTAACTACAGAAAGTTCTTTGAGCTCAAACCAAGTGAAAGGAT TTCCTTTATTCCTCAGGCAATGGAGCATATCCTCAAAGAGCCTGGCAAAAAGGAAAGATACGCCAGAGAAGTTACAGCGC TTCTAAAGGCATTCTCACTGGCAGTTCCACATGACAGGGCAATGAAGATAAAAGAAGAAGTAGGGTTGTTCCAGGCTATA AAATCCGCAATTGCAAAGACAACTGAAACCGGAAAGGAAAGCCAGGAGGAAAAATTTGACAGCGCAATAAAGCAGATTCT TTCAAAGGCTGTGATATCGGATAGAATCATAGATATTTTTGAAGCAGCAGGCATACAAAAGCCAGAGCTATCTATCCTGT CAGATGGTTTTCTTGCTGAAGTAAAAGATATGCCACAAAAGAACTTGGCTTTTGAAGCTCTCAAAAAGCTGCTTAATGAC GAAATCAGGTTCATGTCCAAGAGAAACCTTGTGCAGGCAAAATCGTTCATGGAAATGCTGGACAAGACCATAAAGAAATA CACCAACAGAAACGTTGAGGCAGCGCAGGTAATTGAAGAGTTGATCGAGTTGGCAAAGAAAGTCAGAGCAGAAAAGAACA GAGCCAAGGAGCAGAACATGAGCGAAGACGAGCTGGCATTCTATGATGCGCTCGAAGTAAACGATAGTGCAGTAAAGATT CTTGGGGATGAAACATTGAGAAAGATTGCTGTAGAGTTGACGCAGATGATACGCAACAGCGTAACAATTGACTGGACGCA GAGGGAGAGCGTGCAGGCTGCTATACGTCTGAACGTCAAAAAGATTTTGAGGAAATACGGCTATCCGCCGGACAAGGAAA AGAAGGCTACAGAAACAGTGTTGCGTCAGGCTGAATTAGTCGCCAAAAACTGGGTATCAGGCTGA Protein sequence : MPKAISEADVEENVLAILESMGYKIIRGDNEDCLPGGSSALRADYKDVVLVDRLTDSLRKINPSAPIDALDQAIKQVLRS ESQKLIANNESFHKMLVDGIDIPVQTLEGETYKKIWLFDFEDPENNEFLAVNQFTVVENNIERRPDVILFVNGIPLLVIE LKNLADENATIWTAYDQLQTYKEQLPSLFKYNEILVISDGIEARAGTLTSERERFAQWKTIDGGAPRKGLTEIEVLIRGM CNKQRFLDIVRNFIVFEKDKSVSKKLAAYHQYWAVNKALESTIKARKGNKKAGIVWHTQGSGKSLTMVFYTGKLVRELDN PTVVVLTDRNDLDDQLFGTFSRCQDIIRQEPQQANSRKELQDLLKVSSGGIVFTTIQKFLPEEDNREKYPVLSERDNIVV IADEAHRSQYGFAAKILNKDDKTLITYGYAKYLRDALPNASFIGFTGTPIEKADRSTPAVFGKYVDTYDIEQAVNDGATV RIYYESRLAKLELKPEERPKIDSEFEEVTEGEEVEGKEKLKSKWARVEKVAGAPMRIKRIAKDIVDHFEKRTSVLEGKGM IVCMSRRICVELYNEIVELRPEWKNSDDEKGAIKVVMTGSASDPKEWQEHIRNKIRRKRIGDNFKDPKHELRLIIVRDMF LTGYDAPSLHTMYLDKPMKGHTLMQAIARVNRVYPGKEGGLIVDYMGVGAELKKALMDYTASGGKGKPAFDQEKAVMMMV EKYEVVKDMFHGFNYRKFFELKPSERISFIPQAMEHILKEPGKKERYAREVTALLKAFSLAVPHDRAMKIKEEVGLFQAI KSAIAKTTETGKESQEEKFDSAIKQILSKAVISDRIIDIFEAAGIQKPELSILSDGFLAEVKDMPQKNLAFEALKKLLND EIRFMSKRNLVQAKSFMEMLDKTIKKYTNRNVEAAQVIEELIELAKKVRAEKNRAKEQNMSEDELAFYDALEVNDSAVKI LGDETLRKIAVELTQMIRNSVTIDWTQRESVQAAIRLNVKKILRKYGYPPDKEKKATETVLRQAELVAKNWVSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 48 |
