Gene Information

Name : pdxS (Ngar_c28480)
Accession : YP_006863425.1
Strain : Candidatus Nitrososphaera gargensis enrichment culture Ga9.2
Genome accession: NC_018719
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.-.-.-
Position : 2216877 - 2217848 bp
Length : 972 bp
Strand : -
Note : -

DNA sequence :
ATGACGATATCCCTCGTGGCCACTGAGCCAAAACCAAAGGGCGTCAAGGTAGAAATTGTAGAGAATGCCCGCACGGTTCG
CGGCACTACTTTGTTAAAGCGCGGCTTTGCGCACATGTGCAAGCACGGCGTGGTAATGGACGTGACAAACGTCGAACAGG
CAGTGATAGCAGAGGAAGCAGGCGCAGTAGCAGTGATGGTGCTTGACAAGCTGCCATACGACGTCAGAAAGGCAGGCGGC
GTTGCAAGGACTGCCAGCATCAAGGTAATCCAAGAAATAATGGATGCAGTCACGATCCCGATAATGGCCAAGTGCAGAAT
CGGCCACATCGACGAGGCAAAGGTGCTCGAAGCGACCGGTGTCGACATGATCGACGAAAGCGAAGTGCTGACGCCAGCGG
ACGAAGAGCGTCACATCTGGAAGTGGGATTTCACTACTCCGTTTGTTAACGGCGGCAAGAACCTTGGCGAGGCCCTTCGC
AGGATCGAGGAGGGCTGCGCGATGATAAGGACAAAGGGCGAGCCGGGGACGGGCAACGTGGCAGAGGCAGTCACCCACAT
CCGCATGGTCAACGGCGAGATACGCAAATTGCGCTCGCTCTATGAGGATAACGACAAGCAGGAGCTCATGAAGGCTGCAC
GCGAGCTAAAAGTATCGTACGCGATTGTTGAAGAAACAGCGCGCCTTGGACGGCTGCCGGTTGTCAATTTCGCAGCTGGT
GGTATCACCACGCCGGCCGACGCAGCACTGCTCATGAACCTTGGCTGCGATGGCGTGTTCGTCGGCTCTGGCATATTCAA
ATCAGACGACCCGGCGCAGAGGGCAAGGGCGGTTGTGCTTGCAACGACTTTCCATGACGACCCCAAGATAGTCATGGAGG
CGCAAAAGATGGTCGATGAGAAAAAGTCGCTCCTTGGCATGGACACCAAGAACCTAGAGCTTCGTATGCAGGAAAGGGGC
CAGCACGCTTGA

Protein sequence :
MTISLVATEPKPKGVKVEIVENARTVRGTTLLKRGFAHMCKHGVVMDVTNVEQAVIAEEAGAVAVMVLDKLPYDVRKAGG
VARTASIKVIQEIMDAVTIPIMAKCRIGHIDEAKVLEATGVDMIDESEVLTPADEERHIWKWDFTTPFVNGGKNLGEALR
RIEEGCAMIRTKGEPGTGNVAEAVTHIRMVNGEIRKLRSLYEDNDKQELMKAARELKVSYAIVEETARLGRLPVVNFAAG
GITTPADAALLMNLGCDGVFVGSGIFKSDDPAQRARAVVLATTFHDDPKIVMEAQKMVDEKKSLLGMDTKNLELRMQERG
QHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-61 55
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-61 55
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-61 55