|
Name : serS (Ngar_c17780) Accession : YP_006862368.1 Strain : Candidatus Nitrososphaera gargensis enrichment culture Ga9.2 Genome accession: NC_018719 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1382275 - 1383555 bp Length : 1281 bp Strand : - Note : - DNA sequence : ATGCTCGATCCGAAACTTTTGAAGGAAAATCCACAGGCAGTAAAAGACATGCTAAACAGGCGCAACATGGCCAATTTCCC GCTTGACGAGCTTGTAACTATTGATAGGCGCCGGCGCGAGCTGATCGTTGAAACGCAGGAGCTGCGGCAGAAAAAGAACG TGCTTGCAGAAGCCATCGCGCGCAAGAAAAAGGCCAAGCAGGATGCTTCCTCGGAGCTTGCTCAGATGAAAGAAGTCAGC AGCTACCTCGGAGATAGCGAAGAGGAGCTGGTGAAAACAGAGGGCAGGTTCAAAGAGCTGATGATGGTCGTGCCCAATAT GCTTCACGAGTCCGTGCCAACGGGCAAGGACGAAAAGGACAATGTGGTGGTGCGGCAGAACGGCAGCGCAAAAAAGATGA ATTTCGCACCAAAGGATCATGTCGATATTGCAGCCGCGCTTGACCTTGTAGATGTAGAGCGCGCTGCCAAGGTATCCGGC GCGCGCTTTTACTATTTGAAAAACGAGCTTGTAAAAATGAATCAGGCGCTTGTGAACTTTGCCCTTGATTTTCTGTCAGA GCACAGCTACATTCTAGTCCAGCCTCCTTACATGATAAGAAGGGAGTCGATGTCAGGCGCAGTGATACTTGGCGACTTTC AGGATGTCATTTACAAGGTAGAAGGCGAAGACCTCTACATGATAGGCACGTCAGAGCACGCAATCGCAAGCATGCACATG GACGAGATTCTTGACGGCAAAAAGCTGCCGATAAGGTACGCCGGCTACAGCCCATGCTTCCGCAAAGAAGCAGGCGCGCA CGGAAAGGACATGAAAGGCATCTTTCGGGTGCACCAGTTTGAAAAGGTGGAGCAGTTTGTCTACTGCAGGCCGGAAGACT CGTGGAAAGAACATGAAAGGATGCTCGCGCTTTCTGAAGAATTCTATAACAGGCTTGGCATCCCAAACCGGGTGATGCTC CTGTGCTCTGGCGACACCGGCAAGATATCTGCCAAGACATATGACATCGAGGCGTGGATGGCCGGCCAGAATGCCTATCG CGAGATCGTTTCCTGCTCAAACTGTGTGGACTATCAGGCGCGGAGGCTAGGCATTCGCTTCAGGGATAGGACGAATGAGG AGACGCGCCTTGTGCATACTCTCAATAGCACGCTTGTTGCCACCGAGCGCACGATGGTGGCAATACTTGAAAACTACCAG ACCTCCAATGGCACTGTCGAAGTGCCAGACGCGCTGCAAAAGTACATGGGCGGCATAAAGGAGATCAAGCCCCGCAATTG A Protein sequence : MLDPKLLKENPQAVKDMLNRRNMANFPLDELVTIDRRRRELIVETQELRQKKNVLAEAIARKKKAKQDASSELAQMKEVS SYLGDSEEELVKTEGRFKELMMVVPNMLHESVPTGKDEKDNVVVRQNGSAKKMNFAPKDHVDIAAALDLVDVERAAKVSG ARFYYLKNELVKMNQALVNFALDFLSEHSYILVQPPYMIRRESMSGAVILGDFQDVIYKVEGEDLYMIGTSEHAIASMHM DEILDGKKLPIRYAGYSPCFRKEAGAHGKDMKGIFRVHQFEKVEQFVYCRPEDSWKEHERMLALSEEFYNRLGIPNRVML LCSGDTGKISAKTYDIEAWMAGQNAYREIVSCSNCVDYQARRLGIRFRDRTNEETRLVHTLNSTLVATERTMVAILENYQ TSNGTVEVPDALQKYMGGIKEIKPRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-81 | 41 |
