Gene Information

Name : copA (GGS_0277)
Accession : YP_006858947.1
Strain : Streptococcus dysgalactiae RE378
Genome accession: NC_018712
Putative virulence/resistance : Resistance
Product : copper-exporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.4
Position : 281064 - 283178 bp
Length : 2115 bp
Strand : +
Note : similar to copper-exporting ATPase [Streptococcus pyogenes MGAS2096]

DNA sequence :
ATGAATAATGACAACATGGATAAGTTAAAACACGAGCATGGAATCACAGATGAACATGGATACCATAAGGATCAACATCA
AGTACATCATGCTGGGCATGATCACTGTGGGCACAGTGGGCATGACCACAGCGGGCACAGTGGACATAATCACAGCGGGC
ACAGTGGGCATGCCCACCATCATCACGGAAGCTTTAAGGAACTTTTCTTAAAGTCATTGCCACTAGGAATCATTATTATG
CTCTTAGTCCCTTTGCATGGATTTGAACTACCATTCCAGTTTACTTTTCCATATTCTGATATTGTAGTATCTATTTTATC
TACTATATTAATTATTTATGGTGGACGTCCATTCTATCAAGGTGCAGTTGACGAATTTAAACAAAAAGAACCTGGAATGA
TGGCACTCGTTTCTTTAGGTTTAAGTGTTTCATATTTATACAGTATTTATGCTGTGATCATTACCTACGTAACGGGTGAA
CACGTGATGGACTTTTTCTTTGAATTTGCTTCATTACTATTAATCATGCTATTAGGTCACTGGATTGAGATGAAAGCTAT
TGGAGAAGCAGGAGACGCACAAGCAGAATTGGCTAAGTTAGTACCGAAAGATGCTCACGTTGTATTAGAAGACGATTCAA
TTGAAACACGACCAGTTGCTGACTTACAGGTAGGTGATTTAATTCGTGTTCAAGCCGGAGAAAATGTGCCAGCAGACGGG
ATTATCGAGCGTGGCGAATCACGTTTAAATGAAGCTCTTTTGACTGGAGAATCAAAAGCAGTTAAAAAAGGCCCTGGCGA
TGAAGTAATCGGGGGCTCAACAAATGGAGAAGGGGTTCTTTATATTAAAGTGAATGAGACAGGTGATCAATCCTTCATCT
CTCAAGTTCAGAATTTAATCAGCCAAGCTCAAAGTCAGCCTTCCAGAGCAGAAAATATTGCTCAAAAGGTTGCAGGGTGG
CTCTTCTATATTGCTGTTATTGTCGCGCTAATTGCTTTTGTAGTGTGGATGATTATTGGAGATATCCCAACGGCAGTTAT
ATTTACTATTACTACATTAGTTATTGCTTGTCCGCACGCATTGGGTCTGGCTATTCCATTGGTAACCGCCCGTAGCACAA
GCTTAGGAGCTAGCCGTGGCTTACTAGTAAAAGACCGCCAAGCCTTAGAAATAGCTCAAGATGCAGATGTGATGATTTTA
GATAAAACGGGTACTTTAACAACTGGTGAATTTAAAGTATTAGATGTAAAACTTCTTAATGACAAATATACAAAAGAGGA
AATCATTGCCTTATTGGCAGGTATTGAAGGAGGATCTAGCCACCCAATTGCTCAATCAATTATAAGTTTCGCCGAGCAGC
AAAATATACGTCCAGCATCTTTTGATTCGATTGATGTGATTTCCGGTTCTGGAGTAGAGGGTAAAGCAGGTGGGCACCGT
TACCAATTAATCAGTCAAAAAGCCTATGGACGTAATCTTGATATGGATACTCCAAAAGGAGCAACTCTTAGTGTCTTAGT
AGAAAACGATGATGCCATTGGTGCTGTAGCTTTAGGGGACGAATTAAAACCAACGAGTAAAGAGTTAATTAAAGCTCTTA
AAAAGAACAATATTCGACCAATTATGGCAACAGGTGATAATGAAAAAGCGGCTCAAGGCGCGGCAGTAGATTTAGGGATT
GAATATAGATCAAATCAATCTCCACAAGACAAATATGAGTTAGTTAAAACACTTAAAGATGAAGGAAAGAAAGTTATCAT
GGTAGGTGATGGTGTAAATGATGCTCCTTCTCTTGCCTTAGCAGATGTTGGTATAGCTATAGGTGCTGGAACTCAAGTTG
CATTGGATTCAGCTGATGTCATATTGACTCAATCCGATCCAGGAGATATTGAATCATTCATTGAATTGGCACACAAAACA
ACTCGTAAAATGAAACAAAACCTATTTTGGGGAGCTGGTTATAACTTTATAGCTATCCCTCTAGCTGCAGGAATTTTGGC
TCCTATTGGTATCACATTAAGCCCTGCATTAGGAGCAATCCTAATGTCTGTGTCAACAGTCATCGTCGCCATTAATGCTA
TGTTATTAAGTTTAGATCCAAAAAATAACGGTTAA

Protein sequence :
MNNDNMDKLKHEHGITDEHGYHKDQHQVHHAGHDHCGHSGHDHSGHSGHNHSGHSGHAHHHHGSFKELFLKSLPLGIIIM
LLVPLHGFELPFQFTFPYSDIVVSILSTILIIYGGRPFYQGAVDEFKQKEPGMMALVSLGLSVSYLYSIYAVIITYVTGE
HVMDFFFEFASLLLIMLLGHWIEMKAIGEAGDAQAELAKLVPKDAHVVLEDDSIETRPVADLQVGDLIRVQAGENVPADG
IIERGESRLNEALLTGESKAVKKGPGDEVIGGSTNGEGVLYIKVNETGDQSFISQVQNLISQAQSQPSRAENIAQKVAGW
LFYIAVIVALIAFVVWMIIGDIPTAVIFTITTLVIACPHALGLAIPLVTARSTSLGASRGLLVKDRQALEIAQDADVMIL
DKTGTLTTGEFKVLDVKLLNDKYTKEEIIALLAGIEGGSSHPIAQSIISFAEQQNIRPASFDSIDVISGSGVEGKAGGHR
YQLISQKAYGRNLDMDTPKGATLSVLVENDDAIGAVALGDELKPTSKELIKALKKNNIRPIMATGDNEKAAQGAAVDLGI
EYRSNQSPQDKYELVKTLKDEGKKVIMVGDGVNDAPSLALADVGIAIGAGTQVALDSADVILTQSDPGDIESFIELAHKT
TRKMKQNLFWGAGYNFIAIPLAAGILAPIGITLSPALGAILMSVSTVIVAINAMLLSLDPKNNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 4e-95 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copA YP_006858947.1 copper-exporting ATPase BAC0383 Protein 0.0 83
copA YP_006858947.1 copper-exporting ATPase BAC0079 Protein 4e-122 50
copA YP_006858947.1 copper-exporting ATPase BAC0629 Protein 2e-95 45