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Name : C380_03805 (C380_03805) Accession : YP_006853122.1 Strain : Acidovorax sp. KKS102 Genome accession: NC_018708 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 842661 - 844049 bp Length : 1389 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGCGCCACCCCCTGCCCTACGCCTTTGCCCGCACCGCCCAACTGCTGCTGGAGGACGACGGCCACCAGCTGGTGCTGTG GCACGGCCCCAGCCCCGACGCGGGCGCGCTGTCCGAAGTGCTGCGCAAGCACCCCGTGCAGCAGCTGCTGCCGCTCGATG CCCCGGCCCTGGCCCAGCGCATCAGCGCGGCCTATTCGCACAGCGAATCGAGCGCTGCCACCGTGGTGAGCGAGGTCGAG AGCGACGCCGACCTCTCGCGCATGATGCAGGAGCTGCCGGCCGTCGAAGACTTGCTGGAGTCGGCCGGCGACGCGCCCAT CATCCGCATGCTCAACGCCCTGCTCACGCAGGCCGCGCGCGACGGCGCGAGCGACATCCACATCGAGCCCTACGAGCGCC ACAGCAGCGTGCGCTTTCGGGTGGACGGCACGCTGCGCGAAGTGGTGCAGCCCAACCGCGCGCTGCACGCGGCCCTGATC TCGCGCCTGAAGATCATGGCCGACCTGGACATCAGCGAAAAACGCCTGCCCCAGGACGGCCGCATCAGCCTGCGCCTGGG CACCCGCGCCATCGACGTGCGCGTGTCCACCCTGCCCAGCGCCCATGGCGAACGCGCGGTGCTGCGTCTTTTGGACAAGA GCGAAAGCAAGCTGAGCCTGGAGGCCGTGGGCATGCAGGGCGACACCCTGCACCGCTTCGAGGGCCTGATCGGCCAGCCG CACGGCATCATCCTGGTCACCGGCCCCACGGGCTCGGGCAAGACCACCACGCTGTACGCGGCGCTGGGCCGGCTCGACGC CACGCGCAACAACATCATGACGGTGGAAGACCCCATCGAATACGAGCTGCCCGGCGTGGGGCAAACCCAGGTCAACAGCA AGATCGAGCTGACCTTTGCCAAGGCCCTGCGCGCCATCCTGCGGCAGGACCCGGACATCATCATGATTGGTGAAATCCGC GACTTCGAGACCGCGCAGATCGCCATCCAGGCGTCACTCACCGGCCACCTGGTGCTGGCCACGCTGCACACCAACGATGC GGCCAGCGCCGTCACGCGCCTGACGGACATGGGCGTGGAGCCCTTCCTGTTGTCGTCGTCGCTGCTGGGCGTGCTGGCCC AGCGCCTGGTGCGCAAGTTCTGCACCCACTGCCATGGCGCGGGCTGCGAGCACTGCGGCCAGACGGGTTACACCGGCCGC ACCGGCGTGTTCGAACTGCTGGTGACCACGGACGCGATCCGCGCGCAAATCCACGCCCAGGCGTCAGAGGCCGACATCCG CGCCGCCGCCATGGCCGATGGCATGGCACTGATGCGAGAGGATGGCGAACGCCTGATTGCCGCCGGCATCACCAGCCGCG AAGAAGTGCTGCGGGTGACGCGGGACTGA Protein sequence : MRHPLPYAFARTAQLLLEDDGHQLVLWHGPSPDAGALSEVLRKHPVQQLLPLDAPALAQRISAAYSHSESSAATVVSEVE SDADLSRMMQELPAVEDLLESAGDAPIIRMLNALLTQAARDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALHAALI SRLKIMADLDISEKRLPQDGRISLRLGTRAIDVRVSTLPSAHGERAVLRLLDKSESKLSLEAVGMQGDTLHRFEGLIGQP HGIILVTGPTGSGKTTTLYAALGRLDATRNNIMTVEDPIEYELPGVGQTQVNSKIELTFAKALRAILRQDPDIIMIGEIR DFETAQIAIQASLTGHLVLATLHTNDAASAVTRLTDMGVEPFLLSSSLLGVLAQRLVRKFCTHCHGAGCEHCGQTGYTGR TGVFELLVTTDAIRAQIHAQASEADIRAAAMADGMALMREDGERLIAAGITSREEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-94 | 55 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-94 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| C380_03805 | YP_006853122.1 | general secretory pathway protein E | VFG1876 | Protein | 6e-101 | 57 |
| C380_03805 | YP_006853122.1 | general secretory pathway protein E | VFG0182 | Protein | 4e-102 | 57 |
| C380_03805 | YP_006853122.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-95 | 55 |
| C380_03805 | YP_006853122.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-64 | 45 |
| C380_03805 | YP_006853122.1 | general secretory pathway protein E | VFG0233 | Protein | 9e-73 | 45 |
