Gene Information

Name : C380_23850 (C380_23850)
Accession : YP_006857100.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5182556 - 5183557 bp
Length : 1002 bp
Strand : -
Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation

DNA sequence :
ATGACTCCCGCCCCCGCCGCGCTGCCCCCTTTTGACGCTGATCAGGCCCTGCGCCTGGCCCGCGAGACCTTCGACATCGA
GGCGGCGGCCTTAACCGCTCTGTCAAACCGCGTGGACAAGCTGTTTGCCCAGGCGGTGCAGATGGTGCTGCAGACCCGGG
GCCGTGTGGTGGTGATGGGCATGGGAAAAAGTGGCCATGTGGGCCGCAAGATTGCCGCCACGCTCGCTTCGACTGGTACC
CCCGCGTTTTTCGTACACCCCGCCGAAGCCAGCCATGGCGACCTGGGCATGGTCACGGCTGGCGACGTGGTGCTGGCGCT
GTCCAACAGCGGAGAAGTGGGTGAAGTGACCGCCATCCTGCCCGTGATCAAGCGGCTGGGCGTGCCTTTGATCGCGATGA
CCGGTGGGCTGCAGTCCACGTTGGCGCGCCATGCGGACATCGTGCTCGACTGCGGTGTGGAGCGCGAAGCCTGCCCGCAC
AACCTTGCACCGACAACAAGTACCACGGCCCAGATCGCCATGGGCGACGCGCTGGCCGTGGCCCTGCTGGACGCCCGGGG
CTTCCGCCCCGAAGACTTTGCCCGCTCGCACCCTGGCGGTGCGCTGGGCCGCAAGCTGCTCACCCATGTGAGCGACGTGA
TGCGCTCGGGCACCGAAGTGCCGCGTGTGGCGCCTGACGCCTCGTTCAGCGACCTCATGCGCGAGATGAGCGCCAAGGGC
CTGGGCGCTTCGGCCATCGTCGATGCAGCAGGGCAGGTGCTGGGCATCTTCACCGACGGCGACCTGCGCCGCCGCATCGA
GGCCGGGGCAGACCTGCGGTCCACCACCGCCGCCCAGGTCATGCACCCCAACCCCCGCCGCATTGCCCCCGACGCCCTGG
CCGTGGACGCCGCCGAAATGATGGAGGCCCACGCCATCACCAGCGTGCTGGTGGTGGACGCAGCGGGCGTGCTGGTGGGC
GTGGTCCACATCGGCGACCTGATGCGGGCGAAGGTGATCTGA

Protein sequence :
MTPAPAALPPFDADQALRLARETFDIEAAALTALSNRVDKLFAQAVQMVLQTRGRVVVMGMGKSGHVGRKIAATLASTGT
PAFFVHPAEASHGDLGMVTAGDVVLALSNSGEVGEVTAILPVIKRLGVPLIAMTGGLQSTLARHADIVLDCGVEREACPH
NLAPTTSTTAQIAMGDALAVALLDARGFRPEDFARSHPGGALGRKLLTHVSDVMRSGTEVPRVAPDASFSDLMREMSAKG
LGASAIVDAAGQVLGIFTDGDLRRRIEAGADLRSTTAAQVMHPNPRRIAPDALAVDAAEMMEAHAITSVLVVDAAGVLVG
VVHIGDLMRAKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-60 48
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-60 48
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-60 48