Gene Information

Name : C380_23345 (C380_23345)
Accession : YP_006856999.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5070884 - 5071558 bp
Length : 675 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATCCTCATTGCCGAAGACGACCAGGTGCTGGCCGATGGCCTGCTGCGCACGCTGCGTGCCTCGGGCGCCGTGGT
GGACCATGTCGCCAGCGGCAGCGAGGCCGACGCGGCGCTCATGACCAACAACGAGTTCGACCTGCTCATCCTGGACTTGG
GCCTGCCCAAGATGCATGGGCTGGAAGTGCTGAAAAAGCTGCGCGGCCGGGGCTCTGCCCTGCCGGTGCTGATCCTCACC
GCCGCCGACAGCGTGGAAGAGCGCGTGAAGGGGCTGGACTTTGGCGCCGACGACTACATGGCCAAGCCCTTCAGCCTGCA
GGAGCTGGAAGCCCGCGTGCGCGCCCTCACGCGCCGGGGCATGGGCGGCACCAGCAGCGCCATCAAGCACGGCCCGCTGG
TGTACGACCAGGCCGGCCGCGTGGCCACCATCGACGGCAAGATGATCGAACTTTCCGCCCGCGAGCTGGGCCTGCTGGAA
GTACTGCTGCAGCGCGCCGGCCGCCTGGTGAGCAAGGAGCAGCTGGTGGAGCGCCTGTGCGAGTGGGGCGAAGAGGTGAG
CAACAACGCCATCGAGGTCTACATCCACCGCCTGCGCAAGAAGATCGAGGGCGGGCCCATCCGCATCGCCACCGTGCGCG
GCCTGGGCTACTGCCTTGAGAAGATCCCCAGTTAA

Protein sequence : 
MRILIAEDDQVLADGLLRTLRASGAVVDHVASGSEADAALMTNNEFDLLILDLGLPKMHGLEVLKKLRGRGSALPVLILT
AADSVEERVKGLDFGADDYMAKPFSLQELEARVRALTRRGMGGTSSAIKHGPLVYDQAGRVATIDGKMIELSARELGLLE
VLLQRAGRLVSKEQLVERLCEWGEEVSNNAIEVYIHRLRKKIEGGPIRIATVRGLGYCLEKIPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_23345 YP_006856999.1 two component transcriptional regulator BAC0083 Protein 5e-35 46
C380_23345 YP_006856999.1 two component transcriptional regulator BAC0487 Protein 7e-36 46
C380_23345 YP_006856999.1 two component transcriptional regulator NC_002516.2.879194.p Protein 4e-34 44
C380_23345 YP_006856999.1 two component transcriptional regulator BAC0638 Protein 7e-28 43
C380_23345 YP_006856999.1 two component transcriptional regulator BAC0347 Protein 5e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_23345 YP_006856999.1 two component transcriptional regulator VFG0473 Protein 3e-38 43
C380_23345 YP_006856999.1 two component transcriptional regulator VFG1390 Protein 4e-34 42