Gene Information

Name : C380_19480 (C380_19480)
Accession : YP_006856228.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4226552 - 4227211 bp
Length : 660 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGCGCCTGCTGCTTGTTGAAGACGATTCCATGATCGGCGAAGCCGTGCTGGACCTGCTGCGCGCCGAGCAGTACGCGGT
GGACTGGGCGCGCGATGGCGACGCGGCCGATACGGCACTGCGCACCCAGGCATACGACCTGGTGCTGCTGGACCTGGGCC
TGCCCAAACGCGACGGCCTGGCCGTGCTGCGCGACCTGCGCGCCCGCAAAAACCGCACCCCCGTGCTGGTAGCCACCGCG
CGCGATGCCGTGGCGCAGCGTATCGAGGGGCTGGATGCCGGGGCCGATGACTATGTGCTCAAGCCCTATGACCTGGACGA
GCTGCTGGCCCGCATCCGCGCCCTGCTGCGCCGCGCAGCGGGCCGGGCCGAACCGGTGTACGAGCACCAGGGCGTCAGCA
TCAACCCCGCCACGCGCGAGGTGACCGTGCGCGGCACACCGGTGGTGCTGTCGGGGCGCGAATGGGCGGTGCTGGAGCCG
CTCATTGCGCGGCCCGGCATGGTGCTGTCGCGCCAGCAGCTGGAGGACAAGCTCTACGGCTGGGGCGACGAGGTGAGCAG
CAACGCGGTGGAGGTCTATATCCACGGCCTGCGCAAGAAGCTGGGGCCCGAGCTGGTGCTGAACGTGCGCGGTGTCGGGT
ATCTGGTACCGAAGATGTGA

Protein sequence :
MRLLLVEDDSMIGEAVLDLLRAEQYAVDWARDGDAADTALRTQAYDLVLLDLGLPKRDGLAVLRDLRARKNRTPVLVATA
RDAVAQRIEGLDAGADDYVLKPYDLDELLARIRALLRRAAGRAEPVYEHQGVSINPATREVTVRGTPVVLSGREWAVLEP
LIARPGMVLSRQQLEDKLYGWGDEVSSNAVEVYIHGLRKKLGPELVLNVRGVGYLVPKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_19480 YP_006856228.1 winged helix family two component transcriptional regulator BAC0487 Protein 4e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_19480 YP_006856228.1 winged helix family two component transcriptional regulator VFG0473 Protein 9e-28 41