Name : C380_17650 (C380_17650) Accession : YP_006855862.1 Strain : Acidovorax sp. KKS102 Genome accession: NC_018708 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : - COG ID : - EC number : - Position : 3851410 - 3854028 bp Length : 2619 bp Strand : + Note : COG0249 Mismatch repair ATPase (MutS family) DNA sequence : ATGTCCGACACGCTCGAACACCACACCCCCATGATGCAGCAGTACCTGGCCCTCAAGGCCGGGTACCCCGAGACGCTGCT GTTCTACCGCATGGGCGACTTCTACGAAGTCTTCTGGCAAGACGCCGAAAAGGCCGCGCGCCTGCTCGACATCACACTCA CGCAGCGCGGCCAGTCGGGCGGGCAGCCGGTGGTGATGGCGGGGGTGCCGTTCCACGCGCTGGAGAACTATCTGGCGCGC CTCATCAAGATGGGCGAGTCGGTGGCCATTGCCGAGCAGGTGGGCGAGGTGGGCGCGAGCAAGGGCCCGGTGGAGCGCAA GGTGGTGCGCGTGGTCACGCCCGGCACGCTGACCGACACCGAGCTGCTGTCCGACAAATCCGAATCGCTGCTGATGGCCG TGCACCAGGCGCCCCGCGCGCGCTGTGGCCTGGCCTGGCTGAGCGTGACGCAGGGCCGCGTGTTCCTGGCCGAATGCGCG CTGGACGAACTGGGCGCCTGGCTGGCGCGCGTGGCGCCCAGCGAGCTGATCTACAGCGCAGGCGTGACCGAACGCTTTGA GCAACAACTGCAGGTGCTGCGCCAAGGAGGCGCCTTCACCTGCCCCATGAGCCTGCGGCCCGACTGGCAGTTTGACAGCG CCCTGGGCGAGCGCAAGCTGCTCGAAAACCTGGGCGCCGCCAGCCTGCAGGCCTGGGGTGCGCAAGACCTGGGCGAGGCC CACGCCGCCGCCGCCGGACTGCTCACGTATGCCGAACACACACAGGGCCGCACGCTGACCCACGTGCACAGCGTGCAGGT GCAGCGCAACGACGACCTCATTGACCTGCCCGCCACCACACGCCGCAATCTGGAGCTGGTGAAGACCCTGCGTGGCGACG ATGCGCCCACGCTGTTCTCGCTGCTGGACACCTGCATGACGGGCATGGGCAGCCGCCTGCTCAAGACCTGGCTGCTGGAG CCCCGCCGTGACCGCGCCGAGGCACGCCAGCGCCTGTCGGCCACCACAGCCTTGCGGGGCGCGGGCGGCGCAGGTGGCGG TGCGGGCCCCTGGTCCACACTGCGCAGCGAACTCAAGGGCGTGAGCGATGTGGAGCGCATCACCGCCCGCATTGCGCTGC GCCAGGTGCGCCCGCGCGAGCTGGTCGCGCTGGGCAAGACGCTACAAAAAGCAGAGCTGCTTGCGCTCAATGGACGAGCA CCAGAGCCCTTTTTGATGCAAATCTTCAGCCACCTGCAGCCGCCCGAGGGTTGCATGGCATTGCTGCAGGCCGCGATTGC CGAAGAGCCAGCTGCCCTGGTGCGCGACGGCGGCGTGATCGCCAACGGCTTCGACACCGAGCTGGACGAGCTGCGCGCCA TCCAGACCAATTGCGACGCCTTCTTGCTCGACCTGGAAGTCCGCGAGAAAGCCCGCACCGGTATCCCCAACCTGCGCGTG CAGTTCAACAAGGTGCATGGCTTCTACATCGAGGTCACCAGCAGCCATGTCGAGAAGGTGCCCGATGACTACCGCCGCCG CCAGACGCTGAAAAACGCCGAGCGCTTCATCACGCCCGAACTCAAGGCGTTTGAAGACAAGGCCCTATCGGCCAGCGAGC GTGCACTGGCGCGCGAGAAGTGGCTGTACGAGCAGATCCTGGACCAGCTGCAGCCCCACATTCCGCAGCTGACCCGTCTG GCGCAGGCGCTGGCCACGCTCGATGTGCTGTGCACGCTGGCCGAGCGATCCCTCACCCTGAACTGGTGCGCGCCCCAGTT CGTGCCCGAGCCCTGCATCGAGATCGAGGGCGGCCGTCACCCCGTGGTCGAAGCCCGCCTGGCCGAGACATCCAGCGGCA GCTTCATCGCCAACCACACGCGGCTCAACGCCAACACGCGCATGCAGGTCATCACCGGCCCCAACATGGGCGGTAAATCG ACCTACATGCGGCAGGTGGCGCTGATCGTGCTGCTGGCCAGCATGGGCAGCCATGTGCCTGCCGCGAGCTGCCGCCTGGG CCCCATTGACGCCATCCACACCCGCATCGGCGCGGCCGACGACCTGGCCAACGCGCAGTCCACCTTCATGCTGGAGATGA CCGAGGCCGCGCAGATCCTGCACGCCGCCACGCCCCACAGCCTGGTGCTGATGGACGAGATCGGCCGGGGCACCAGCACG TTCGACGGCTTGGCGCTGGCCAGTGGCATCGCCACGCACCTGCATGACAAGACCCGCGCCTTCACGCTGTTTGCCACGCA CTACTTCGAACTGACCGAGCTGCCTGCCAAGGCGCGCCATGCGATCAACATGCATGTGAGTGCCACCGAGAGCGGCGCGG ACATCGTGTTCCTGCACGAGATTCAGCCCGGCCCAGCCAGCCGCAGCTACGGGATTCAGGTGGCCAAGCTGGCGGGCATG CCCTCGCCCGTGCTGCACCACGCTCGCCATGCGCTGGCGGCGCTCGAAGAACGCGCGGGCGAGGATGAGTTGCAGGTGGA CCTGTTCGCCGCCCCCGAGGTGCCCGAGAGCGTGGTCGCCAGCCCGGTGGAAGCCGCGCTGGCCGGCATCAACCCCGACG CGATGAGCCCCCGCGAAGCGCTGGACGCGCTGTACCAGCTCAAGAAGATGCTGGGCTGA Protein sequence : MSDTLEHHTPMMQQYLALKAGYPETLLFYRMGDFYEVFWQDAEKAARLLDITLTQRGQSGGQPVVMAGVPFHALENYLAR LIKMGESVAIAEQVGEVGASKGPVERKVVRVVTPGTLTDTELLSDKSESLLMAVHQAPRARCGLAWLSVTQGRVFLAECA LDELGAWLARVAPSELIYSAGVTERFEQQLQVLRQGGAFTCPMSLRPDWQFDSALGERKLLENLGAASLQAWGAQDLGEA HAAAAGLLTYAEHTQGRTLTHVHSVQVQRNDDLIDLPATTRRNLELVKTLRGDDAPTLFSLLDTCMTGMGSRLLKTWLLE PRRDRAEARQRLSATTALRGAGGAGGGAGPWSTLRSELKGVSDVERITARIALRQVRPRELVALGKTLQKAELLALNGRA PEPFLMQIFSHLQPPEGCMALLQAAIAEEPAALVRDGGVIANGFDTELDELRAIQTNCDAFLLDLEVREKARTGIPNLRV QFNKVHGFYIEVTSSHVEKVPDDYRRRQTLKNAERFITPELKAFEDKALSASERALAREKWLYEQILDQLQPHIPQLTRL AQALATLDVLCTLAERSLTLNWCAPQFVPEPCIEIEGGRHPVVEARLAETSSGSFIANHTRLNANTRMQVITGPNMGGKS TYMRQVALIVLLASMGSHVPAASCRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHAATPHSLVLMDEIGRGTST FDGLALASGIATHLHDKTRAFTLFATHYFELTELPAKARHAINMHVSATESGADIVFLHEIQPGPASRSYGIQVAKLAGM PSPVLHHARHALAALEERAGEDELQVDLFAAPEVPESVVASPVEAALAGINPDAMSPREALDALYQLKKMLG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 5e-150 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
C380_17650 | YP_006855862.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-164 | 47 |