Gene Information

Name : C380_17650 (C380_17650)
Accession : YP_006855862.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3851410 - 3854028 bp
Length : 2619 bp
Strand : +
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGTCCGACACGCTCGAACACCACACCCCCATGATGCAGCAGTACCTGGCCCTCAAGGCCGGGTACCCCGAGACGCTGCT
GTTCTACCGCATGGGCGACTTCTACGAAGTCTTCTGGCAAGACGCCGAAAAGGCCGCGCGCCTGCTCGACATCACACTCA
CGCAGCGCGGCCAGTCGGGCGGGCAGCCGGTGGTGATGGCGGGGGTGCCGTTCCACGCGCTGGAGAACTATCTGGCGCGC
CTCATCAAGATGGGCGAGTCGGTGGCCATTGCCGAGCAGGTGGGCGAGGTGGGCGCGAGCAAGGGCCCGGTGGAGCGCAA
GGTGGTGCGCGTGGTCACGCCCGGCACGCTGACCGACACCGAGCTGCTGTCCGACAAATCCGAATCGCTGCTGATGGCCG
TGCACCAGGCGCCCCGCGCGCGCTGTGGCCTGGCCTGGCTGAGCGTGACGCAGGGCCGCGTGTTCCTGGCCGAATGCGCG
CTGGACGAACTGGGCGCCTGGCTGGCGCGCGTGGCGCCCAGCGAGCTGATCTACAGCGCAGGCGTGACCGAACGCTTTGA
GCAACAACTGCAGGTGCTGCGCCAAGGAGGCGCCTTCACCTGCCCCATGAGCCTGCGGCCCGACTGGCAGTTTGACAGCG
CCCTGGGCGAGCGCAAGCTGCTCGAAAACCTGGGCGCCGCCAGCCTGCAGGCCTGGGGTGCGCAAGACCTGGGCGAGGCC
CACGCCGCCGCCGCCGGACTGCTCACGTATGCCGAACACACACAGGGCCGCACGCTGACCCACGTGCACAGCGTGCAGGT
GCAGCGCAACGACGACCTCATTGACCTGCCCGCCACCACACGCCGCAATCTGGAGCTGGTGAAGACCCTGCGTGGCGACG
ATGCGCCCACGCTGTTCTCGCTGCTGGACACCTGCATGACGGGCATGGGCAGCCGCCTGCTCAAGACCTGGCTGCTGGAG
CCCCGCCGTGACCGCGCCGAGGCACGCCAGCGCCTGTCGGCCACCACAGCCTTGCGGGGCGCGGGCGGCGCAGGTGGCGG
TGCGGGCCCCTGGTCCACACTGCGCAGCGAACTCAAGGGCGTGAGCGATGTGGAGCGCATCACCGCCCGCATTGCGCTGC
GCCAGGTGCGCCCGCGCGAGCTGGTCGCGCTGGGCAAGACGCTACAAAAAGCAGAGCTGCTTGCGCTCAATGGACGAGCA
CCAGAGCCCTTTTTGATGCAAATCTTCAGCCACCTGCAGCCGCCCGAGGGTTGCATGGCATTGCTGCAGGCCGCGATTGC
CGAAGAGCCAGCTGCCCTGGTGCGCGACGGCGGCGTGATCGCCAACGGCTTCGACACCGAGCTGGACGAGCTGCGCGCCA
TCCAGACCAATTGCGACGCCTTCTTGCTCGACCTGGAAGTCCGCGAGAAAGCCCGCACCGGTATCCCCAACCTGCGCGTG
CAGTTCAACAAGGTGCATGGCTTCTACATCGAGGTCACCAGCAGCCATGTCGAGAAGGTGCCCGATGACTACCGCCGCCG
CCAGACGCTGAAAAACGCCGAGCGCTTCATCACGCCCGAACTCAAGGCGTTTGAAGACAAGGCCCTATCGGCCAGCGAGC
GTGCACTGGCGCGCGAGAAGTGGCTGTACGAGCAGATCCTGGACCAGCTGCAGCCCCACATTCCGCAGCTGACCCGTCTG
GCGCAGGCGCTGGCCACGCTCGATGTGCTGTGCACGCTGGCCGAGCGATCCCTCACCCTGAACTGGTGCGCGCCCCAGTT
CGTGCCCGAGCCCTGCATCGAGATCGAGGGCGGCCGTCACCCCGTGGTCGAAGCCCGCCTGGCCGAGACATCCAGCGGCA
GCTTCATCGCCAACCACACGCGGCTCAACGCCAACACGCGCATGCAGGTCATCACCGGCCCCAACATGGGCGGTAAATCG
ACCTACATGCGGCAGGTGGCGCTGATCGTGCTGCTGGCCAGCATGGGCAGCCATGTGCCTGCCGCGAGCTGCCGCCTGGG
CCCCATTGACGCCATCCACACCCGCATCGGCGCGGCCGACGACCTGGCCAACGCGCAGTCCACCTTCATGCTGGAGATGA
CCGAGGCCGCGCAGATCCTGCACGCCGCCACGCCCCACAGCCTGGTGCTGATGGACGAGATCGGCCGGGGCACCAGCACG
TTCGACGGCTTGGCGCTGGCCAGTGGCATCGCCACGCACCTGCATGACAAGACCCGCGCCTTCACGCTGTTTGCCACGCA
CTACTTCGAACTGACCGAGCTGCCTGCCAAGGCGCGCCATGCGATCAACATGCATGTGAGTGCCACCGAGAGCGGCGCGG
ACATCGTGTTCCTGCACGAGATTCAGCCCGGCCCAGCCAGCCGCAGCTACGGGATTCAGGTGGCCAAGCTGGCGGGCATG
CCCTCGCCCGTGCTGCACCACGCTCGCCATGCGCTGGCGGCGCTCGAAGAACGCGCGGGCGAGGATGAGTTGCAGGTGGA
CCTGTTCGCCGCCCCCGAGGTGCCCGAGAGCGTGGTCGCCAGCCCGGTGGAAGCCGCGCTGGCCGGCATCAACCCCGACG
CGATGAGCCCCCGCGAAGCGCTGGACGCGCTGTACCAGCTCAAGAAGATGCTGGGCTGA

Protein sequence :
MSDTLEHHTPMMQQYLALKAGYPETLLFYRMGDFYEVFWQDAEKAARLLDITLTQRGQSGGQPVVMAGVPFHALENYLAR
LIKMGESVAIAEQVGEVGASKGPVERKVVRVVTPGTLTDTELLSDKSESLLMAVHQAPRARCGLAWLSVTQGRVFLAECA
LDELGAWLARVAPSELIYSAGVTERFEQQLQVLRQGGAFTCPMSLRPDWQFDSALGERKLLENLGAASLQAWGAQDLGEA
HAAAAGLLTYAEHTQGRTLTHVHSVQVQRNDDLIDLPATTRRNLELVKTLRGDDAPTLFSLLDTCMTGMGSRLLKTWLLE
PRRDRAEARQRLSATTALRGAGGAGGGAGPWSTLRSELKGVSDVERITARIALRQVRPRELVALGKTLQKAELLALNGRA
PEPFLMQIFSHLQPPEGCMALLQAAIAEEPAALVRDGGVIANGFDTELDELRAIQTNCDAFLLDLEVREKARTGIPNLRV
QFNKVHGFYIEVTSSHVEKVPDDYRRRQTLKNAERFITPELKAFEDKALSASERALAREKWLYEQILDQLQPHIPQLTRL
AQALATLDVLCTLAERSLTLNWCAPQFVPEPCIEIEGGRHPVVEARLAETSSGSFIANHTRLNANTRMQVITGPNMGGKS
TYMRQVALIVLLASMGSHVPAASCRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHAATPHSLVLMDEIGRGTST
FDGLALASGIATHLHDKTRAFTLFATHYFELTELPAKARHAINMHVSATESGADIVFLHEIQPGPASRSYGIQVAKLAGM
PSPVLHHARHALAALEERAGEDELQVDLFAAPEVPESVVASPVEAALAGINPDAMSPREALDALYQLKKMLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 5e-150 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_17650 YP_006855862.1 DNA mismatch repair protein MutS VFG0562 Protein 1e-164 47