Gene Information

Name : C380_17350 (C380_17350)
Accession : YP_006855802.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3777489 - 3778256 bp
Length : 768 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGAGCGTGGCGGGCGACACTCCCCTCATCCGCCTGCGTAGCGTGACCAAGGTCTATGGCGAAGGGGCGCTGGCTTTTCA
GGCGCTCAAGGGCGTGGACCTCGACATTGCACAGGGCGACTTTGTGGCCATCATGGGCCCCAGTGGCTCGGGAAAGTCCA
CCGCCATGAACACGCTGGGCTGCCTGGACCGGCCCACCACGGGCGAATACCTGTTCAAGGGCGTGCATGTGGAGTCGCTC
TCGCGCGACGAGCGGGCTCGACTGCGGCGGCGCTACTTTGGCTTTGTGTTCCAGGGCTTCAACCTGCTGGCGCGCACCTC
GGCGCAAGAGAACGTGGAGCTGCCCCTGCTGTACCGAGGCGAATCCGCCGCGGCGCGCCATGCGGCCGCGGCCCGGGCAC
TGGATGCGGTCGGCCTCAAGGGCTGGGAGCACCACACGCCTGCCGAGCTGTCGGGCGGGCAGCAGCAGCGCGTGGCGATT
GCGCGCGCCATCGTCACCGAGCCCGATGTGCTGCTGGCCGATGAGCCCACCGGCAACCTCGATACGCAACGCAGCATCGA
GATCATGGAACTGCTGTGGCGCCTGAATGCCGACCACGGCATCACTGTGCTCATGGTCACGCACGAGCCCGACATGGCCC
AGTACGCGCGGCGCATCGTGCGGTTTGTGGATGGTGTGGTGGACAGCGATGCCGCCAACCCGCACCCCAAGGGGCTGGAT
GCGGATGCGGTATCGAACTTGGTCACGGCGGATTCAGGAGGCCACTGA

Protein sequence :
MSVAGDTPLIRLRSVTKVYGEGALAFQALKGVDLDIAQGDFVAIMGPSGSGKSTAMNTLGCLDRPTTGEYLFKGVHVESL
SRDERARLRRRYFGFVFQGFNLLARTSAQENVELPLLYRGESAAARHAAAARALDAVGLKGWEHHTPAELSGGQQQRVAI
ARAIVTEPDVLLADEPTGNLDTQRSIEIMELLWRLNADHGITVLMVTHEPDMAQYARRIVRFVDGVVDSDAANPHPKGLD
ADAVSNLVTADSGGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-25 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_17350 YP_006855802.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-48 52
C380_17350 YP_006855802.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-38 50
C380_17350 YP_006855802.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-33 43
C380_17350 YP_006855802.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-29 41