|
Name : C380_17210 (C380_17210) Accession : YP_006855774.1 Strain : Acidovorax sp. KKS102 Genome accession: NC_018708 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 3744032 - 3745558 bp Length : 1527 bp Strand : + Note : COG4584 Transposase and inactivated derivatives DNA sequence : GTGATAGACGTGGCAACACTGAGTGTCATCAGGCGCTGGGCCCTGCGAGAGCAGTTGTCCATCCGGGAGATCGCCCGCCG CACGGGCCTCTCGCGCAACACCATCCGCAAGTACCTGCGCGCTGGCGAGGCCGAGCCGCACTACGCCAAGCGGGTCAGTC CATCCAAGCTCGATCCCTTCGCCTTGAAGCTCGCCGGCTGGCTCAAGACGGAAGCTGGCCGATCCCGCAAGCAGCGGCGC ACCATCAAGCAGATGTACTTGGATCTGCAGGCGCTCGGTTATGGCGGCTCCTACAACCGTGTGGCGGCCTTTGCGCGCCT CTGGCACGAGCAGCGCCTTGTGGCACAGCAGACCACTGGCCGTGGCACCTTCGTTCCCCTGACCTTCGGTCCGGGTGAGG CCTTCCAGTTCGACTGGAGCGAGGACTGGGCTGTTCTCGCTGGCGTGCGCACCAAGCTGCAGGTAGCCCACTTCAAGCTC AGTCACAGCCGAGCGTTCTACCTGCGCGCCTATCCGCTGCAGACGCACGAGATGCTGTTCGATGCCCACAACCATGCGTT CGTGGTCCTGGGTGGCGTGCCCCGCCGTGGCATCTACGACAACATGCGCACCGCTGTAGACCGGGTGCGCCGTGGCAAGG AGCGCGACGTCAATGCGCGCTTTGCGGCCATGGTCAGCCACTTCCTGTTCGAGGCCGAGTTCTGCAACCCGGCCTCGGGC TGGGAGAAAGGCCAGGTGGAGAAGAACGTGCGCGATGCCCGCCATCGCCTGTGGCAGGTCGTGCCGCCATTCCCAAGCCT TCCTGAGCTCAATGCATGGCTGCAGGAGCGCTGCGTGGCTCTGTGGCACGAGATCGCGCACGGCAAGCTGCCTGGCACCG TCGCGGATGTCTGGGCCCAAGAGAAGGCAGCCTTGATGCCGATGTTCCGGCCCTTCGATGGCTTTGTGGAGCACACCAAG CGCGTCTCACCCACCTGCCTGGTCCACTTCGAGCGCAATCGCTACAGCGTGCCAGCCCCGTATGCCAATCGGCCTGTGAG CTTGCGGGTCTACGCAGATCGTCTTGTGGTTGCGGCCGAAGGCCAGATCGTTTGCGAGCACCAGCGCCTGATCGAGCGTA ACCACCATGGTGCCGGGCAAACCGTGTACGACTGGCGCCACTACCTGGCGGTGCTGCAGCGCAAACCAGGAGCTTTGCGC AACGGCGCCCCATTCCTGGAGTTGCCGCCGGCCTTCAAGCGACTGCAGGCCACCTTGCTCAAGCAAACCGGTGGCGACCG AGAGATGGTGGAGGTTCTGGCTCTGGTGCTGCACCACGATGAACAGGCTGTGCTCGCTGCAGTGGAGTTGGCACTGGAGT CAGGGGCTGCCAGCAAGACGCACATCCTGAACGTGCTGCACCGCCTGCTGGACGGTAAGCCCGCTCCAGCACCGGTCACA TCGCCGCAGGCCCTCAAGCTGGAGGTGGAACCCCAAGCCAATGTGCTTCGCTATGACCAATTGAGGGGTGTGCGCTATGC GTCATGA Protein sequence : MIDVATLSVIRRWALREQLSIREIARRTGLSRNTIRKYLRAGEAEPHYAKRVSPSKLDPFALKLAGWLKTEAGRSRKQRR TIKQMYLDLQALGYGGSYNRVAAFARLWHEQRLVAQQTTGRGTFVPLTFGPGEAFQFDWSEDWAVLAGVRTKLQVAHFKL SHSRAFYLRAYPLQTHEMLFDAHNHAFVVLGGVPRRGIYDNMRTAVDRVRRGKERDVNARFAAMVSHFLFEAEFCNPASG WEKGQVEKNVRDARHRLWQVVPPFPSLPELNAWLQERCVALWHEIAHGKLPGTVADVWAQEKAALMPMFRPFDGFVEHTK RVSPTCLVHFERNRYSVPAPYANRPVSLRVYADRLVVAAEGQIVCEHQRLIERNHHGAGQTVYDWRHYLAVLQRKPGALR NGAPFLELPPAFKRLQATLLKQTGGDREMVEVLALVLHHDEQAVLAAVELALESGAASKTHILNVLHRLLDGKPAPAPVT SPQALKLEVEPQANVLRYDQLRGVRYAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 3e-150 | 64 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 6e-109 | 51 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 8e-92 | 44 |
