Gene Information

Name : C380_15900 (C380_15900)
Accession : YP_006855513.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3463415 - 3464380 bp
Length : 966 bp
Strand : -
Note : COG3039 Transposase and inactivated derivatives, IS5 family

DNA sequence :
ATGACCCAACAAGACCTCGGCCTGAACCTGAGCACGCGGCGTACTCGCAAAACCGTGTTCCTCGACGAGATGAACCTGGT
GGTGCCGTGGACGGAGTTGCTGTCGTTGATTGCGCCGCATGTACCTCGCGCCAAGACCGGACGCCCGCCGTTTGAGCTGG
TGACGATGTTGCGCATTCATTTCTTGCAACAGTGGTTCGGCCTGAGTGACCTGGCCATGGAAGAAGCCCTGTTCGAGACC
ACGCTGTACCGCGAGTTCGCGGGACTCTCCAGCGCCGAGCGCATCCCTGACCGGGTCAGCATCCTGCGCTTTCGCCACCT
GCTCGAAGAACACCAGTTGGCCCCGCAGATGCTGGCCGTGGTCAACGCCACCCTGGCCGACAAAGGCTTGATGCTCAGAC
AAGGCACGGTGGTGGACGCCACCTTGATTGCTGCGCCCAGTTCGACCAAGAACCAGGATGGCAAGCGTGATCCCGAGATG
CACCAGACCAAGAAGGGCAACCAGTGGCATTTCGGCATGAAAGCGCACATCGGCGTGGACGCTGACTCGGGACTGGTGCA
CACCGTGGTCGGTACAGCAGCCAACGTCAACGACGTGACACAGGCCAGTGCGTTGGTCCATGGCGAAGAAACGGATGTGT
TCGCTGACGCCGGCTACCAGGGCGTGACCAAGCGCGAAGAAGTCCAAGGCATCGATGCCAACTGGCATGTGGCCATGCGT
CCGGGCAAGCGCCGCGCGATGGACAAGAACAGTCCCATGGGCGCCGTGCTCGACCAGCTTGAACACGTCAAGGCCCGAAT
CCGGGCCAAGGTGGAACACCCGTTTCGGGTCATCAAACGGCAGTTCGGCCACATGAAAGTGCGCTATCGGGGACTGGCCA
AAAACACGGCACAGTTGCACACGCTGTTTGCACTGAGCAATCTTTGGATGGTGCGACGCCGACTGTTGCAAGGGCTGCAG
GCGTGA

Protein sequence :
MTQQDLGLNLSTRRTRKTVFLDEMNLVVPWTELLSLIAPHVPRAKTGRPPFELVTMLRIHFLQQWFGLSDLAMEEALFET
TLYREFAGLSSAERIPDRVSILRFRHLLEEHQLAPQMLAVVNATLADKGLMLRQGTVVDATLIAAPSSTKNQDGKRDPEM
HQTKKGNQWHFGMKAHIGVDADSGLVHTVVGTAANVNDVTQASALVHGEETDVFADAGYQGVTKREEVQGIDANWHVAMR
PGKRRAMDKNSPMGAVLDQLEHVKARIRAKVEHPFRVIKRQFGHMKVRYRGLAKNTAQLHTLFALSNLWMVRRRLLQGLQ
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 3e-80 66
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 2e-80 66
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 2e-95 66
unnamed AAO33449.1 putative transposase Not tested Not named Protein 2e-67 57
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 7e-70 50
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 7e-70 50