Gene Information

Name : C380_14020 (C380_14020)
Accession : YP_006855141.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : transposase, IS4 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3073390 - 3074352 bp
Length : 963 bp
Strand : +
Note : COG3039 Transposase and inactivated derivatives, IS5 family

DNA sequence :
ATGAAGCAAAGCAGCCTTGATCTGAGCCTGAGTACCAAGAAGACCCGCAAGCAGGAGCTTCTTGCCCAGATGGATCTGGT
GGTTCCCTGGGCTGCGTTGGTCGAGCTCATCACGCCGTATTACCCAGAAGGCAAGAACGGTCGCCCACCCTTTGCACTGG
AGACCATGCTGCGCATCCACTGCATGCAACAGTGGTTCACCCTGTCAGATCTGGCGATGGAAGAAGCCTTCTTTGATACC
CCGATCTACCGAGAGTTTGCCCAGCTCGATGCCCATGGACGAATACCGGATGAGAGCACCATCCTGAGGTTTCGCCATCG
GCTGGAGAAACATAAGCTGGCCGATCAGATTCTGGCCACCGTCAATGATCTGCTGGCAGCCCAGGGCTTGCTGCTCAAGG
CCGGAACAGCCGTGGACGCCACCTTGATTGCAGCACCGAGTTCCACCAAGAACAAGGACAGAAAGCGCGATCCAGAGATG
CACTCCAGCCAAAAGGGCAACGAGTGGCACTTTGGCATGAAGGCCCATATCGGCGTGGACGCGGACTCTGGGCTGGTGCA
CACCGTCATCGGCACCTCGGGCAACGTGTCTGATGTGGTGGAAGGCAACAGTTTGCTCCATGGTCAGGAGACAGACGTCT
TTGGGGATGCGGGCTACCAAGGCGCACACAAGCGCTCCGATGCCAGCAAAGACGTCACCTGGCATGTGGCGATGCGCCCA
GGCAAGCGCAAAGAGCTGGACAAAGAGAACAACCCCGTTGATGCGCTCATAGACCAAGTGGAGAAGATCAAGGCCAGCAT
CCGGGCCAAGGTGGAACACCCCTTCAGGGTGATCAAACGACAGTTTGGCTATACCAAGGTGCGTTACCGGGGGCTCAAGA
AGAACACGTTGCAGCTCAAGACGCTGTTTGCACTATCGAACCTGTGGATGGTGCGCCACCAATTGCTGGCGGCGCAGGGA
TGA

Protein sequence :
MKQSSLDLSLSTKKTRKQELLAQMDLVVPWAALVELITPYYPEGKNGRPPFALETMLRIHCMQQWFTLSDLAMEEAFFDT
PIYREFAQLDAHGRIPDESTILRFRHRLEKHKLADQILATVNDLLAAQGLLLKAGTAVDATLIAAPSSTKNKDRKRDPEM
HSSQKGNEWHFGMKAHIGVDADSGLVHTVIGTSGNVSDVVEGNSLLHGQETDVFGDAGYQGAHKRSDASKDVTWHVAMRP
GKRKELDKENNPVDALIDQVEKIKASIRAKVEHPFRVIKRQFGYTKVRYRGLKKNTLQLKTLFALSNLWMVRHQLLAAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 9e-82 60
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 9e-67 59
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 7e-67 59
unnamed AAO33449.1 putative transposase Not tested Not named Protein 7e-54 54
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 4e-61 48
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 4e-61 48