Gene Information

Name : C380_13560 (C380_13560)
Accession : YP_006855051.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2957852 - 2958538 bp
Length : 687 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCACCGCATATTGCTGATTGACGACGACGCGCAGTTGGGCGCGCCCCTGGCCACTTACTTCCAGCGTTTTGAGCTGGA
GCTAGTTCACGCCCTTCGGCCCAGCGATGGCCTGGCGCAACTGACAGCCGGCGGCTTCGACGCGGCCATCCTCGACGTCA
TGCTGCCGGAAATGGATGGCTTCGAGCTGTGCCGCACCATCCGCAAGCAGGGCGACCTGCCCATCGTGATGCTGACCGCA
CGCGGCGAGGTGATGGACCGTGTGGTGGGGTTGGAACTGGGGGCCGACGACTATCTGCCCAAGCCCTTCGAGCCGCGCGA
GTTGGTGGCACGCCTGCAGACGGTGTTGCGTCGACGCCGGGCGCCAGGGCCCGGTGTTGCAGCGGGCTCGCTGGAGTTTG
AGGGCCTGTCCATCGATGCCGCGCGCCGCAGCGTACAGCGCCACGGCGAGGTGGTGGAGCTGACCGGCACGGAGTTCGAC
CTGTTGCACCTGCTGGCGCGCGAGCCGGGCAAAGTCTTCAGCCGGGACGACATCCTGAACCAGCTGCGCGGACATGAAGC
CGAGCTGTACACCCGCGCGGTGGACATCGTGGTGAGCCGGTTGCGCAAAAAGCTGGAGCCGCTGGACTGCATCAAGACGC
TGCGCAATGTGGGCTATTCCCTGGCCCTGCGCCGCGCTGCCCCATGA

Protein sequence : 
MHRILLIDDDAQLGAPLATYFQRFELELVHALRPSDGLAQLTAGGFDAAILDVMLPEMDGFELCRTIRKQGDLPIVMLTA
RGEVMDRVVGLELGADDYLPKPFEPRELVARLQTVLRRRRAPGPGVAAGSLEFEGLSIDAARRSVQRHGEVVELTGTEFD
LLHLLAREPGKVFSRDDILNQLRGHEAELYTRAVDIVVSRLRKKLEPLDCIKTLRNVGYSLALRRAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_13560 YP_006855051.1 two component transcriptional regulator CP001918.1.gene5135. Protein 5e-28 43
C380_13560 YP_006855051.1 two component transcriptional regulator CP000675.2.gene1535. Protein 1e-35 42
C380_13560 YP_006855051.1 two component transcriptional regulator NC_008702.1.4607594. Protein 4e-33 42
C380_13560 YP_006855051.1 two component transcriptional regulator CP004022.1.gene3215. Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_13560 YP_006855051.1 two component transcriptional regulator VFG0596 Protein 4e-24 41