Gene Information

Name : C380_11995 (C380_11995)
Accession : YP_006854738.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase sdr
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2607626 - 2608423 bp
Length : 798 bp
Strand : -
Note : COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

DNA sequence :
ATGACACTTCCCACCCAAGCCCCTTCCACATCCCACATCCACTTCGGCCTTCGTGATCGCGTTTGCATCGTCACCGGGGG
CGCCCAAGGCATTGGCGAGGCCTGTGTCCGCCGTTTTGCGGCCGAAGGCGCCAAACCGGTGATCGTGGATGTGGACGATG
CGCGCGGCCGGGCGCTGGCGCAGGAGCTGGGTGCGCTGTACGTCAGCTGCGATGTGGGCGATAAATCGCAAGTAGATGCG
CTGGTGTCCCAGACCCTGGCGGCCCATGGTCGCATCGACGTGCTGGTGAACAACGCCGGCATCTTCCGCTCGGCAGATTT
TCTGGACGTGACCGAGGCCGACTTTGACGCCGTGTTGAGGGTCAATCTCAAGGGCTCGTTCCTGGTCGGTCAGGCGGTAG
CGCGGGCCATGGTCGCGTCGGGTGGTGGATCTATCGTCAACATGAGTTCGGTCAACGGTGTGCTGACCATTCCCAACATC
TCCAGCTACAACGTGAGCAAAGGCGGCGTGAACCAGCTCACGCGCGTGATGGCGCTGGCGCTGGCCGACAAGAACATCCG
AGTGAACGCCGTGGCGCCGGGCACCATTGCCACCGAACTGGCCGCCAAGGCCGTGCTGACCAGCGATGAGGCCAAGAACA
AGATCATGAGCCGCACGCCCATGAAGCGGCTGGGCGAGCCGTCGGAGATTGCCGATGTGGTGGCCTGGCTGGCGAGCGAC
GCGGCGAGCTATGTGACCGGAGAGATCGTGACCGTGGACGGCGGGCGCATGACGCTCAACTACACCGTGCCGGTCTGA

Protein sequence :
MTLPTQAPSTSHIHFGLRDRVCIVTGGAQGIGEACVRRFAAEGAKPVIVDVDDARGRALAQELGALYVSCDVGDKSQVDA
LVSQTLAAHGRIDVLVNNAGIFRSADFLDVTEADFDAVLRVNLKGSFLVGQAVARAMVASGGGSIVNMSSVNGVLTIPNI
SSYNVSKGGVNQLTRVMALALADKNIRVNAVAPGTIATELAAKAVLTSDEAKNKIMSRTPMKRLGEPSEIADVVAWLASD
AASYVTGEIVTVDGGRMTLNYTVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-32 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-32 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-33 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 3e-32 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-32 41