Gene Information

Name : C380_11840 (C380_11840)
Accession : YP_006854707.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : TonB-dependent receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2576517 - 2578634 bp
Length : 2118 bp
Strand : +
Note : COG1629 Outer membrane receptor proteins, mostly Fe transport

DNA sequence :
ATGACCCACACCTTTTCTACCCACCGCTTTGTTTCTCGCCGCGCCCGTCCGGCCCTCCACCCCGTGGCCCTGGCAACCCT
GCTGGCGCTGTCGGGCACCAGCGTTGCCACCCAGGCGCAGACTGCGCCCGTGCCCGCTGCCGCGGCGGACGCCGCACCCA
GCCTGCCCGCTGTCACCGTGTCGGCCAGCGGCCTGCAATTGGGCGCCAGCGACATGACCACCCCCGCCACCGTGCTGGAA
GGCGATGAACTGGTGCGCCGGCGCGAGGCCACGCTGGGCGAAACGCTGAACAGCGAGCCCGGCATCACCAGCAGCCACTT
TGGCGCCGGTGCCAGCCGCCCCATCATCCGCGGCATGGACGGCCCGCGCGTCAAGGTGCTGAGCGATGGCGCCGAGCTGC
ACGACGCCTCCACCATCAGCCCCGACCACGCCGTGGTGTCCGAGCCGCTGCTGGCCACGCAGATCGAGGTGCTGCGCGGC
CCCTCGGCCCTGGTCTATGGCAACGGCGCCGTGGGCGGCGTGGTCAACGTGCTGGACGGCAAGGTGCCCACCGCCATCCC
GCAAAAGGGCTACGAAGGCAGCGCCGAGCTGCGCGCCAACTCGGGGGCGGGAGAGGGCGCTGGAGCCTTCTCACTGACCG
GCGGTGCGGGCAACCTGGCTGTGCACGTAGAGGGCGTGGCGCGGGATGCGGGCGACTACCGCGTGGGCAAGGGCTGGTCG
GGCGGCAGCAAAGTGCTGGGCAGCTTCAACCGCACGGACACCGGCAGCGTGGGCCTGTCGTGGGTGGGCGACCAGGGCTA
CCTGGGTGCGGCCTACACCCGCCAGACCGCCAAATACGGCCTGCCTGGTCACAACCACAGCTTTGACGGCTGCCACACCC
ATGGCGACCACCTGCACTGCGGCGCCCATGCGGACGACGAAACCGACGGCCATGACCACGACCATGACGCTGCGGCAGGC
GATGTGCCGGTGGTGGACCTGCGTAGCGAACGCTTTGACGTGCGGGGCGAGCTGCGCAACCCGTTTGCGGGCTTCTCGGC
ACTGCGGCTGCGGGCGGGTGTCACCGACTACAAACACGACGAAGTCGAAGACGGCGCCATCAGCACGACCTTCAAGAACA
AGGCCTACGACACACGCGTGGAGCTGCAACACGAGCCCATCGGCGGCTTCAAGGGCGTGATCGGCCTGCAGACCTCGCAG
CGCAAGTTCAGCGCCGAGGGCGAGGAGGCCTATGTGCAGCCCACCGTGACCCGCAAGACAGGCCTCTTCGTGCTGGAGGA
GTACCGCTGGAATGACTGGCGCTTTGAAGCCGCCCTGCGTCACGACCGCCAGACGGCCGAAGCCCAGACCAGCGGCATCG
AGCGCAGCCACAACGGCACGTCGGCATCGCTGGGCGCGGTGTGGAAGTTCACGCCGGGCTACCAGGTGGGCACCTCGTTC
ACCCGCGCCAGCCGTGCCCCGTCGGCCGAAGAGCTGTACGCCCAAGGCCTGCACATGGCCACCAGCACCTACGAACGCGG
CAATGCCGACCTGCGCTCCGAAATCTCGCAGAACATCGATGTCAGCCTGAAGAAGACCAGTGGCGACACCACCTTTGGCG
TGAGCGTGTTCCGCAACCGCATCAACAACTACATCTATGGCCGCACCCTGGATGAACTGGACGGCTTGCAGCTGCTGCAA
TACAGCCAAGCCGACGCCACCTTCACCGGCATCGAAGGCCAGGTGCGCCAGCGCCTCACGCGCAATCTGGGCATCACGCT
GTTTGGCGACACCGTGCGCGCCAAGCTGGACGGCGGTGGCCTGCTGCCGCGCATCCCGGCCACTCGCGCAGGTATCCGCC
TAGATGCCAACTGGCAGGCGTGGGAAGGGCAGGTTGAATGGGTGCAGGTGGCCCGCCAGAACCGCGTGGCCGACTTTGAA
ACCGCCACGCCCGGCTACGGCATGCTGAACCTTGGCGTAAGCTACAACGGCCAGTTCAGCAGCGGTACCCCCTGGCAGGT
GTACCTGAAGGCCAACAACCTGACGGACCGCCTGGCCTATGCACACACCTCGTTCATCAAGACCGCTGCGCCGCTGATGG
GCCGCAACATCACGCTGGGGGTGAAGGTGGCGTTCTGA

Protein sequence :
MTHTFSTHRFVSRRARPALHPVALATLLALSGTSVATQAQTAPVPAAAADAAPSLPAVTVSASGLQLGASDMTTPATVLE
GDELVRRREATLGETLNSEPGITSSHFGAGASRPIIRGMDGPRVKVLSDGAELHDASTISPDHAVVSEPLLATQIEVLRG
PSALVYGNGAVGGVVNVLDGKVPTAIPQKGYEGSAELRANSGAGEGAGAFSLTGGAGNLAVHVEGVARDAGDYRVGKGWS
GGSKVLGSFNRTDTGSVGLSWVGDQGYLGAAYTRQTAKYGLPGHNHSFDGCHTHGDHLHCGAHADDETDGHDHDHDAAAG
DVPVVDLRSERFDVRGELRNPFAGFSALRLRAGVTDYKHDEVEDGAISTTFKNKAYDTRVELQHEPIGGFKGVIGLQTSQ
RKFSAEGEEAYVQPTVTRKTGLFVLEEYRWNDWRFEAALRHDRQTAEAQTSGIERSHNGTSASLGAVWKFTPGYQVGTSF
TRASRAPSAEELYAQGLHMATSTYERGNADLRSEISQNIDVSLKKTSGDTTFGVSVFRNRINNYIYGRTLDELDGLQLLQ
YSQADATFTGIEGQVRQRLTRNLGITLFGDTVRAKLDGGGLLPRIPATRAGIRLDANWQAWEGQVEWVQVARQNRVADFE
TATPGYGMLNLGVSYNGQFSSGTPWQVYLKANNLTDRLAYAHTSFIKTAAPLMGRNITLGVKVAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2619 YP_002152328.1 TonB-dependent receptor Not tested Not named Protein 1e-96 41