Gene Information

Name : C380_11155 (C380_11155)
Accession : YP_006854570.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2428425 - 2429126 bp
Length : 702 bp
Strand : +
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
ATGTCCGAACCCTCCCCGCTGCCCAAGACACCGCCCGCCACCCCCATCATTGCCGTGGAGCATGTGTTCAAGTCGGTGAC
GGATTCCACCGGAACCCTCGACATTCTGCGGGATATCGATTTCCGCCTGGCTGCCAGGGAAACGGCGGCCATCGTTGGCG
CCTCGGGCTCGGGCAAGAGCACGCTGCTGTCCATCATCGCGGGGCTCGATACGCCCACCCGTGGCACGGTGCGCCTGGAC
GGCCAGGACCTGTTTGCCATTGACGAAGATGCACGGGCTGCGCTGCGCGCCCAGAAAGTGGGCTTTGTGTTCCAGAGTTT
CCAGCTCATGGGCAACCTGACGGCGCTGGAAAACGTGATGCTGCCGCTGGAGCTGGCCGAGCGCCGCGATGCGCGCAAGG
CCGCCACCGAGATGCTGGCGCGGGTCGGGCTGGGCCAGCGCCTGTCGCATTACCCCAAGGTGCTATCAGGTGGCGAGCAG
CAGCGCGTGGCCCTGGCCCGGGCTTTTGTGGTGCAACCGGCCGTGCTGCTGGCCGATGAACCCACGGGAAGCCTGGACTT
TGCGACGGGCGAAACCATCATGAAGCTCATGTTCGAGCTCAATCGCGAGCTGGGCACGACCCTGGTGCTGGTGACCCACG
ACCGTGCGATTGCTGCCCAGTGCGAGCGGCGCATCACCATCGACGCAGGGCGTGTTGTGTAA

Protein sequence : 
MSEPSPLPKTPPATPIIAVEHVFKSVTDSTGTLDILRDIDFRLAARETAAIVGASGSGKSTLLSIIAGLDTPTRGTVRLD
GQDLFAIDEDARAALRAQKVGFVFQSFQLMGNLTALENVMLPLELAERRDARKAATEMLARVGLGQRLSHYPKVLSGGEQ
QRVALARAFVVQPAVLLADEPTGSLDFATGETIMKLMFELNRELGTTLVLVTHDRAIAAQCERRITIDAGRVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_11155 YP_006854570.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-39 47
C380_11155 YP_006854570.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_11155 YP_006854570.1 ABC transporter-like protein VFG2059 Protein 5e-14 42