Gene Information

Name : C380_10635 (C380_10635)
Accession : YP_006854466.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2309569 - 2311938 bp
Length : 2370 bp
Strand : +
Note : COG2183 Transcriptional accessory protein

DNA sequence :
ATGCAGCAGATCGTTCGGCAGTTGGCCGCAGAAATCAAAGTCAGTGAACAACAGGTGCGTGCAGCGGTGGAGCTGCTGGA
CGGCGGTGCCACGGTGCCGTTCATCGCCCGCTACCGCAAGGAAGTGACGGGCGGGCTGGACGATATTCAGTTGCGCGAAC
TGGAGGCACGGCTGGCCTACCTGCGCGAGCTGGAAGACCGCCGCGTGGCCGTGCTCAAGGCCATCGACGAACAAGGCAAG
CTGACCGACGCTCTGCGTGCCGCCATTGCCGCCGCGCCCACCAAGCAAGAGCTGGAAGACATCTACCTGCCGTTCAAGCA
AAAGCGCCGCACCAAGGGCCAGATTGCGCGCGAGTTCGGCATCGAGCCGCTGGCCGACAAGCTGTTTGCCGACCCCACGC
TGGACCCTGCCGTGGAGGCCGCCGCGTTCACCAAGCCGCCCGAAGTGCTGGACGACGGCAAGCCCGGCGCCGATTTCTCC
ACCGTGCCCGCCGTGCTCGACGGTGTGCGCGACATCCTCTCCGAGCGCTGGGCCGAAGACCCTGCCCTGGTGCAAAGCCT
GCGCGAGTGGTTGTGGGCCGAGGGCCTGCTGCGCAGCAAGAAGGTGGACAGCAAGAACGAGAACGACCCCGAGGTCTCCA
AGTTCCGCGACTACTTCGACTACGACGAGCCGATTGGCCGCGTGCCCTCGCACCGCGCGCTGGCGGTGTTCCGCGGGCGC
GGGCTGGAGATTCTGGAAGCCAAGCTGGCGCTGCCGGTGGAGCCCGAACCTGGCAAGCCCAGCATCGCCGAAGGCAAGAT
CGCCCTGCACCTGGGCTGGAGTCACCAGGGCCGCAAGGCGGACGACCTGATCCGCAAATGCGTGGCCTGGACCTGGCGCG
TGAAGCTCAGCCTCTCCACCGAGCGCGACCTGTTTGCCCGCCTGCGCGACGAGGCCGAGAAGGTGGCGATCAAGGTGTTT
GCCGACAACCTGCGCGACCTGCTGTTGGCCGCACCGGCCGGCCCGCGCGTAGTGATGGGGCTGGACCCCGGCATCCGCAC
CGGCGTGAAGGTGGCCGTGGTGGACGCCACCGGCAAGCTGGTGGAGACCGCCACGGTGTACCCGCACGAGCCCAAGCGCG
ACTGGGATGGCTCGCTCTTCACACTGGCCAAGCTCGTGGAAAAACATGGCGTGAACCTGATTGCGATTGGCAACGGCACG
GCCAGCCGCGAGACCGACAAACTGGCCGCCGATCTGATCAAGATGGCCGCCAAGGCCGACCGCGCCATCGAGAAGGTGGT
GGTGAGCGAGGCGGGTGCCTCGGTGTATTCCGCCAGCGAATACGCATCGCAAGAGATGCCTGATGTGGACGTGAGCCTGC
GCGGCGCCGCCTCCATCGCTCGCCGCCTGCAGGACCCACTGGCCGAGCTGGTCAAGATCGACCCCAAGAGCATCGGCGTG
GGCCAGTACCAGCACGACGTGAACCAGAGCGAGCTGGCACGCACCCTGGGCACGGTGGTGGAAGACTGCGTGAACTCTGT
GGGTGTGGACCTGAACACGGCTAGCGTGCCGCTGCTGTCGCGTGTGTCGGGCCTGTCGGGCAGCGTGGCCAAGGCCGTGG
TGCGCTGGCGCGAGGCCAACGGCGCGTTCAAGAGCCGCAAGCAGCTGATGGAAGTGGCGGGCCTGGGCGCCAAGACCTTT
GAGCAGAGCGCGGGCTTCTTGCGCATTCGCGGCGGTGACAACCCGCTGGACATGACGGGCGTGCACCCCGAGACCTACCC
GGTGGTCGAGCAGATCATAGAAAAGACCGGCAAGCCGGTGGCCGAGTTGATGGGCCGCGCCGACATGCTCAAGACGCTCA
AGCCCGAGTTGTTCGCCAACGAAAAGTTTGGCGTGATCACCGTCAAGGACATCCTGGCCGAGCTGGAAAAGCCCGGCCGC
GACCCGCGCCCCGACTTCAAGGTGGCGCGCTTCAATGACGGCGTGGAAGACATCAAGGACCTGAAGGAAGGCATGATCCT
GGAGGGCACGGTGAGCAACGTGGCCCAGTTCGGCGCCTTTGTGGACCTGGGCGTGCACCAGGACGGTCTGGTGCATGTGA
GCCAGCTGGCGCACAAGTTTGTGAACGACGCCCGCGAGGTGGTCAAGACCGGCGACATCGTCAAGGTCAAGGTCATGGAA
GTGGACGTGGAGCGCAAGCGCATCGGCCTGTCGATGAAGCTGGATGCCGCACCACCACGCCAGGGCGGTGACCGGGGCGC
TCCCCGTGACAACCGCTTTGAGGGCGCAGCCCGTGGCTATGCACAGCCCCAGCGCCGTGGGCCCGAGCCTGTGCAGCAGT
CGGCCATGGCGTCGGCATTTGCGAAGTTGCAACAGGCCAAAGGCCGCTGA

Protein sequence :
MQQIVRQLAAEIKVSEQQVRAAVELLDGGATVPFIARYRKEVTGGLDDIQLRELEARLAYLRELEDRRVAVLKAIDEQGK
LTDALRAAIAAAPTKQELEDIYLPFKQKRRTKGQIAREFGIEPLADKLFADPTLDPAVEAAAFTKPPEVLDDGKPGADFS
TVPAVLDGVRDILSERWAEDPALVQSLREWLWAEGLLRSKKVDSKNENDPEVSKFRDYFDYDEPIGRVPSHRALAVFRGR
GLEILEAKLALPVEPEPGKPSIAEGKIALHLGWSHQGRKADDLIRKCVAWTWRVKLSLSTERDLFARLRDEAEKVAIKVF
ADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKLVETATVYPHEPKRDWDGSLFTLAKLVEKHGVNLIAIGNGT
ASRETDKLAADLIKMAAKADRAIEKVVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQDPLAELVKIDPKSIGV
GQYQHDVNQSELARTLGTVVEDCVNSVGVDLNTASVPLLSRVSGLSGSVAKAVVRWREANGAFKSRKQLMEVAGLGAKTF
EQSAGFLRIRGGDNPLDMTGVHPETYPVVEQIIEKTGKPVAELMGRADMLKTLKPELFANEKFGVITVKDILAELEKPGR
DPRPDFKVARFNDGVEDIKDLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLAHKFVNDAREVVKTGDIVKVKVME
VDVERKRIGLSMKLDAAPPRQGGDRGAPRDNRFEGAARGYAQPQRRGPEPVQQSAMASAFAKLQQAKGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 56