Gene Information

Name : C380_07880 (C380_07880)
Accession : YP_006853921.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1715140 - 1716039 bp
Length : 900 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCTTGCTCCCAGTCTGAATGCCATCGACACCTTTGTGGACGCCCTGTGGCTGGAAGACGGCCTGTCGCGCAACACGCT
GGCCGCCTACCGGCGTGACCTGACGCTGTACGCGCAGTGGCTGGCCGACCAGCAGCCCGCGCTGGCGCTGGACGACACGG
CCGAACACCACCTGCAGGCCTACTTTGCCGCCCGCCACGCGCAGACGCGCGCCACCTCGGCCAACCGGCGCCTCACGGTG
TTGCGCCGCTACTTTCACTGGGCGCTGCGCGAGCGGCGCATCACCACCGATCCCACCGTGCGGCTGCAGGCCGCACGCCA
GCCGCTGCGCGTGCCCAAGACCTTGTCGCAGGCGCAGGTGGAGGCGCTGCTGAACGCGCCCGACCTGGGCACCCCCCTGG
GCCTGCGCGACCGCACCATGCTGGAGCTGATGTACGCCAGCGGCCTGCGCGTGACCGAGCTGGTCACGCTCAAGACCTTT
CAGGTCGGCCTGAACGAGGGCGTGCTGCGGGTGATGGGCAAGGGCAGCAAGGAGCGCCTGGTGCCGTTTGGCGAAGAGGC
GCGGGCGTGGCTGCTGCGCTATCTGAACGAGGCCCGCGGCGCCATCCTGGGCGGGCAGCAGACGGACGACCTGTTCGTCA
CCCAGCGCGGCAGTGGCATGACGCGGGTGATGTTCTGGGTCATCGTCAAAAAGTGGGCGCAGGTGGCGGGCATCACGGTG
CCGCTGTCGCCCCACACGCTGCGTCATGCGTTTGCCACGCACCTGCTCAACCACGGTGCCGACCTGCGCGTGGTGCAGCT
GCTGCTGGGCCATGCGGATATCTCCACCACCACCATCTACACCCACGTGGCGCGCGAGCGGCTCAAGTCCTTGCACGCGC
AGCACCACCCGAGAGGCTAG

Protein sequence :
MLAPSLNAIDTFVDALWLEDGLSRNTLAAYRRDLTLYAQWLADQQPALALDDTAEHHLQAYFAARHAQTRATSANRRLTV
LRRYFHWALRERRITTDPTVRLQAARQPLRVPKTLSQAQVEALLNAPDLGTPLGLRDRTMLELMYASGLRVTELVTLKTF
QVGLNEGVLRVMGKGSKERLVPFGEEARAWLLRYLNEARGAILGGQQTDDLFVTQRGSGMTRVMFWVIVKKWAQVAGITV
PLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTTIYTHVARERLKSLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-56 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-56 54