Gene Information

Name : C380_07775 (C380_07775)
Accession : YP_006853900.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1690848 - 1691498 bp
Length : 651 bp
Strand : -
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
ATGACGCTGCTGCGTGTGCAGAACCTGGGCAAGCACTACGGCAGCACGCCGGTGTTTGCCAACGTGCAGTTCGCCGTGGC
GCCGGGCGAGTTTGTCGCCATCGTGGGCGACTCGGGCGTGGGCAAGTCCACGTTGCTCAACTGCCTGGCAGGCCTCGACA
CCTGGGACACCGGCAGCATCACCCACGGCACCACCGACCTGGGCCAGCTGGACGACACTGCCCGCGCCCTGTGGCGCCGC
GCGCAGGTGGGTTTTGTGTTCCAGGCCTTCCACGTGTTGCCGCACCTGGACGTGGCACAGAACGTGGCCCTGCCGCTGAT
GCTACTGGGCCAAAGTGATGCCGCCCGCGTGCAGCACATGCTGGCCGCCGTGGGCCTGGAAGGGCTGGGTGCACGGCTGC
CTCAGCAGCTCAGCGGCGGGCAGCTGCAGCGTGTGGCCATTGCCCGCGCGCTGGTGCACCGCCCCGCCCTGCTGCTGGCC
GACGAGCCCACCGGTAACCTCGACCCCACCACCGCCACGCGCGTGATGGACCTGCTGCTGGCCCAGACGCGCGAGCACGG
CGCATCGCTGGTGCTGGTCACCCATTCCGACGCCGCCGCGGCGCGGGCCGACCGGGTGCTACGGCTCACGGCCAGCGGTA
TCGCGGCCTAG

Protein sequence : 
MTLLRVQNLGKHYGSTPVFANVQFAVAPGEFVAIVGDSGVGKSTLLNCLAGLDTWDTGSITHGTTDLGQLDDTARALWRR
AQVGFVFQAFHVLPHLDVAQNVALPLMLLGQSDAARVQHMLAAVGLEGLGARLPQQLSGGQLQRVAIARALVHRPALLLA
DEPTGNLDPTTATRVMDLLLAQTREHGASLVLVTHSDAAAARADRVLRLTASGIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_07775 YP_006853900.1 ABC transporter NC_008702.1.4606598. Protein 3e-28 49
C380_07775 YP_006853900.1 ABC transporter NC_012469.1.7686878. Protein 2e-31 45
C380_07775 YP_006853900.1 ABC transporter CP001581.1.gene798.p Protein 1e-37 43
C380_07775 YP_006853900.1 ABC transporter NC_012469.1.7685735. Protein 6e-29 41