Gene Information

Name : C380_00085 (C380_00085)
Accession : YP_006852385.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 16430 - 17833 bp
Length : 1404 bp
Strand : +
Note : COG0460 Homoserine dehydrogenase

DNA sequence :
ATGTACCGCGATCCCGTCCAGTCCCTCGAAGCCCCGTTGTTGCCGTCGTCCGCCACGGCCATGCGCCCCCTGCGCGTGGG
CATGATTGGCATTGGTACCGTGGGCGCAGGCACCTTTCGCGTGCTGGCGCGCAACCAGGCGCTGATTGCCGCCCGCGCGG
GCCGGGGCATCAAGCTGGTGGTGGTCTGCGCCCGCAGCCTGGCCCGCGCCATGAGTGTGGTGGGCAAGGACGTGGCGCTG
ACCAACGACCCGATGCAAGTCGCCACGCACCCCGACGTGGATGTGCTGGTGGAGGCCGCCGGCGGCACCGGCCCCGCGCG
CGACTGGGTGCTGGCCGCCATCCGCGCGGGCAAACATGTGGTCACCGCCAACAAGGCGTTGCTGGCCGAGCATGGCAACG
AGATCTTTGCCGCCGCGCGCCAGCACGGCGTGGCCGTGGCCTACGAAGGCGCGGTGGCGGTCAGCATCCCCATCGTGAAG
GCGCTGCGCGAGGGCCTCACGGCCAACCGCATCGAGTGGGTGGCGGGCATCATCAACGGCACCACCAACTTCATCCTGAG
CAAGATGCGCGACGAGGGTGTGGGCTTTGCCGAAGCGCTGGCGCAGGCCCAGGCGCTGGGCTACGCCGAGGCCGACCCGA
CGTTTGACATCGAAGGCATGGACGCCGCGCACAAGATCTCGCTGCTGGCGGCCAATGCGTTTGGCATGCCGGTGCGGTTT
GCCGATGCGCAGGTGGAGGGCATCACCGCACTGCAGGGCCTGGACGTGGCATGCGCCGAGCAACTGGGCTTTCGCATCAA
GCTGCTGGGCGTGGCCAAGCGGCGCAAGGAAGGTGACGCAGAAGGCAATTTAGAGGGGGTTGAGCTGCGCGTGCAGCCCG
CGCTGGTGCCCGCCACACATTTGCTGGCGCATGTGAACGGGTCGATGAACGCCGTGATGGTCAAGGGCGATGCGTCGGGC
GTGACGATGTACTACGGCGCGGGCGCGGGGGCGGAGCAGACCGCATCGGCCGTGATTGCCGACCTGGTGGATGTGGCGCG
GCTCGATGGCACCCACGCGGCGCAGCGCGTGCCACACCTGGGCTTCCACCCCCAGGCCGTGGACGAGCAACTGGCGGTAC
TGCCCCGGGCGGCCGTGCACACCCGCCACTATCTACGCGTGCCGGTGCACAGCGCCCAGCAGATCGAGGCCGTGGGCGCC
TGGCTGGCTGCGCAGCAGGTGCCGGTGCTGCAGGTGGCACTGGCGCTCGACAAGGCCTTGCCCCCCGGCAGCGGCCCTCA
GGTGCTGGTGCTGACCGATGCCGTGGCGCAGTCCACCGTGGACCTGGCCGTGTTTGCACTGGCGGCGCACCCTGCAGTGG
CGGGGCCGGTGGTCACGCTGCGGGTGGAGACACTGGAAGGGTGA

Protein sequence :
MYRDPVQSLEAPLLPSSATAMRPLRVGMIGIGTVGAGTFRVLARNQALIAARAGRGIKLVVVCARSLARAMSVVGKDVAL
TNDPMQVATHPDVDVLVEAAGGTGPARDWVLAAIRAGKHVVTANKALLAEHGNEIFAAARQHGVAVAYEGAVAVSIPIVK
ALREGLTANRIEWVAGIINGTTNFILSKMRDEGVGFAEALAQAQALGYAEADPTFDIEGMDAAHKISLLAANAFGMPVRF
ADAQVEGITALQGLDVACAEQLGFRIKLLGVAKRRKEGDAEGNLEGVELRVQPALVPATHLLAHVNGSMNAVMVKGDASG
VTMYYGAGAGAEQTASAVIADLVDVARLDGTHAAQRVPHLGFHPQAVDEQLAVLPRAAVHTRHYLRVPVHSAQQIEAVGA
WLAAQQVPVLQVALALDKALPPGSGPQVLVLTDAVAQSTVDLAVFALAAHPAVAGPVVTLRVETLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 2e-76 44
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 2e-76 44