Gene Information

Name : C380_07390 (C380_07390)
Accession : YP_006853823.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1612777 - 1614081 bp
Length : 1305 bp
Strand : -
Note : COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase

DNA sequence :
ATGCTGACCTCCATCGCAACAAAACCCCGAATTGCCATCATCGGTCTTGGTTATGTTGGCCTGCCACTGGCCGTCGAGTT
TGGCAAGCATTTTCCCGTTGTCGGTTTCGATATACACCAACCACGCATCCTTGAATTGCAATCAGGTTACGACCGAACGC
AAGAAACAAGCGCGCAGCAGATACAGGCTGCCACGCAGTTGCAATACAGCTCAAACCCCAAAGATCTAGAAGACTGCAAT
ATCTACATCGTGACAGTCCCCACGCCTGTGGACGATGCCAAGCGCCCAGATTTGTCGACGTTGATCAAAGCGAGTCAAAC
CATAGGGCACGCCATGCGCCCGGGTGCTCTGGTGATCTATGAGTCCACGGTCTACCCAGGCGTCACTGAAGATGTCTGTG
TACCAGTGCTGGAGGGCTCCTCCGGATTGCGCTTCAACCATGACTTTTTTTGTGGCTATAGCCCAGAGCGCGTGAATCCT
GGCGACAAGATCAATACGCTAACGCGCATCCGCAAGATCACAAGTGGCAGCACACCTGAAGCCGCGGAGGCTGTTGATCA
ACTCTACCGTCGCATCATCACTGCAGGCACTTACCAAGCGCGTAGCATCCGGGTTGCAGAAGCTGCCAAAGTCATAGAAA
ACACTCAGCGTGATCTGAACATTGCCTTGATGAACGAACTTTCAATATTGTTCAACCGGCTGGACATCGACACGCTAGAG
GTCCTTGAAGCCGCTGGTAGCAAATGGAATTTCGTTCCTTTCCGACCAGGTCTGGTAGGTGGGCACTGCATTGGTGTGGA
CCCATACTATCTCACCCACAAGGCCGAGCAGGTAGGCTACCACCCGCAAATCATTCTGGCGGGCCGTCGCATCAACGACA
ACATGGCAGGCTACGCAGCGCGCAGCACGGTCAAGATGATGCTGCGCGCGGGCATGGATGCACCGCGCTGCAAAGTCGGG
GTATTGGGGATCACCTTTAAGGAAAACTGCCCAGATATCCGTAACAGCAAGGTCGTCGATTTGGTGCGCGAGCTGCAAAT
CTGGGGCATGGACGTGGTGGTTGCCGATCCCGTTGCCAACCCACAAGAAGTGCAACTGGAATACAACATTGCGCTAGGAA
CCATCGACGAACACCACCCTGTAGACGCACTGATCGTGGCGGTTGGACATACTAGCTACCGAGCGCTTTCTGCCGAGCAA
CTTCGTGCTTACTGCCGCCATGTCAGCCCTGTGCTGGCAGACATCAAGTCGCTGTATGACCGCGACGAACTGGCCCAGGC
AGGGTTTACCGTTTTTCGACTCTGA

Protein sequence :
MLTSIATKPRIAIIGLGYVGLPLAVEFGKHFPVVGFDIHQPRILELQSGYDRTQETSAQQIQAATQLQYSSNPKDLEDCN
IYIVTVPTPVDDAKRPDLSTLIKASQTIGHAMRPGALVIYESTVYPGVTEDVCVPVLEGSSGLRFNHDFFCGYSPERVNP
GDKINTLTRIRKITSGSTPEAAEAVDQLYRRIITAGTYQARSIRVAEAAKVIENTQRDLNIALMNELSILFNRLDIDTLE
VLEAAGSKWNFVPFRPGLVGGHCIGVDPYYLTHKAEQVGYHPQIILAGRRINDNMAGYAARSTVKMMLRAGMDAPRCKVG
VLGITFKENCPDIRNSKVVDLVRELQIWGMDVVVADPVANPQEVQLEYNIALGTIDEHHPVDALIVAVGHTSYRALSAEQ
LRAYCRHVSPVLADIKSLYDRDELAQAGFTVFRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-112 58
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-112 58
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-107 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_07390 YP_006853823.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 1e-112 58