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Name : lysS (C380_07295) Accession : YP_006853806.1 Strain : Acidovorax sp. KKS102 Genome accession: NC_018708 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1594032 - 1595576 bp Length : 1545 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCAGACCAAATCCACGCCCCCGCACCCCAGGACGACAACCAGCTCATCGCCGAGCGCCGCGAAAAGCTCCGCGCTCT GCGCGAAGCCCAGGCCAACGGCGGTAGCGTTGCTTTCCCCAACAACTTCAAGCCCGCCCACAAGGCGGCGCAGTTGCACC TGGAACACAGCGCGGCCACCAACGAGTCGCTGGAAGCCACGCCGGTGAACGTTTCCGTGGCTGGCCGCATGATGCTCAAG CGCGTGATGGGCAAGGCCAGCTTTGCCACCATCCAGGACGGCTCGCTGGGCGAGGTGGGTGGCCGCATCCAGCTGTATGT GACCCGCGACGCCGTGGGCGAGGATCTGTATGCGGCCTTCAAGCACTGGGACTTGGGCGACATCCTGGGCGCCGAGGGCA CGCTGATGAATACAAAGACTGGCGAGCTGTCGGTCAAGGTGACCAGCCTGCGCCTGCTGACCAAGAGCCTGCGCCCGCTG CCCGACAAGTTTCACGGCATGGCCGACCAGGAGCAGAAGTACCGCCAGCGCTATGTGGACCTGATCACCGATGAGCAGGC CCGCAAGCGCTTCGTGGCCCGCAGCAAGGCCGTAAGCGGCCTGCGCGAGTTCATGGTGAGCCACGGCTTCCTCGAAGTCG AAACGCCCATGCTGCACCCCATCCCGGGCGGTGCCAATGCCAAGCCGTTCGTGACGCACCACAATGCTTTGGAGCAGGAG ATGTACCTGCGCATCGCGCCCGAGCTGTACCTGAAGCGCCTGATCGTGGGCGGCTTCGAGCGCGTGTTCGAGATCAACCG CAGCTACCGCAACGAAGGCATCTCGGTGCGCCACAACCCCGAGTTCACCATGATGGAGTTCTACGCGGCGTACTGGAACT ACCTGGACCTGATGGACTTCACGGAGACGCTGATCCGCGAGGTGGCGCTCAAGGCCACGGGCTCGCTGCAGATGACGTAC CAGGGCCGCGCGGTGGACCTGTCCCAGCCGTTTGCCCGCCTGACGATCCGTGAAGCCATCTTCCAGCACACCGAAGCGGG TGCCCATGTGGACGATGCCGCCTGGCTCATCAGCGCGCTGAAAAAGCTGGGCATGACGGAAGAGAAGGACAAGCTCTCCA CCCGAACCCTGGCCAGCCTGCAGGTGCTGTACTTTGAAGAAACGGTGGAAGACAAGCTGTGGCAGCCCACCTTCATCATG GAGCACCCGACCGAGATCTCGCCGCTGGCACGTGCCAATGACAACCGCCCCGAGGTGACCGAGCGCTTTGAGCTGTACAT CACGGGCCGCGAGTTCGGTAACGGCTTCAGCGAGCTGAACGACGCCGAAGACCAGGCCGCGCGCTTCCACGCCCAGGTGG CGGCCAAGGACAGCGGCGACGACGAGGCCATGTTCTACGACCACGACTTCGTGCGCGCACTGGAATACGGCATGCCACCG ACGGGGGGTTGCGGCATCGGCATTGACCGCCTCATGATGCTGCTGACAGACAGCCCCAGCATTCGCGACGTGATCCTGTT CCCTGCGCTGCGCCGCGAGTCCTGA Protein sequence : MSDQIHAPAPQDDNQLIAERREKLRALREAQANGGSVAFPNNFKPAHKAAQLHLEHSAATNESLEATPVNVSVAGRMMLK RVMGKASFATIQDGSLGEVGGRIQLYVTRDAVGEDLYAAFKHWDLGDILGAEGTLMNTKTGELSVKVTSLRLLTKSLRPL PDKFHGMADQEQKYRQRYVDLITDEQARKRFVARSKAVSGLREFMVSHGFLEVETPMLHPIPGGANAKPFVTHHNALEQE MYLRIAPELYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYLDLMDFTETLIREVALKATGSLQMTY QGRAVDLSQPFARLTIREAIFQHTEAGAHVDDAAWLISALKKLGMTEEKDKLSTRTLASLQVLYFEETVEDKLWQPTFIM EHPTEISPLARANDNRPEVTERFELYITGREFGNGFSELNDAEDQAARFHAQVAAKDSGDDEAMFYDHDFVRALEYGMPP TGGCGIGIDRLMMLLTDSPSIRDVILFPALRRES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-128 | 55 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-78 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006853806.1 | lysyl-tRNA ligase | VFG1668 | Protein | 1e-128 | 55 |
