Gene Information

Name : C380_06325 (C380_06325)
Accession : YP_006853613.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : P4-family integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1374204 - 1375433 bp
Length : 1230 bp
Strand : -
Note : COG0582 Integrase

DNA sequence :
ATGGCCACCATTACCGATACCAAAGCCAGGAACATCAAACCCTCTGACACCGCCATTCCCCATGGAAGCGTGACCGGATT
GGCACTACATCCTTCCAACCTGAAGGGCCATGGAAAGTGGGTCCTCCGATACGTAAGCCCCGTGTCGGGCAAACGTCGAA
ACGCGGGCTTGGGTTCTTACCCGGAGATCAGCATCGCCGAAGTAGGCAAGCGTGCGACCGCCATGCGTATTGCACTAGCG
GAGGGCAAGGATCCTCTGGAGGAAAAGGCAAAGCTAGAAGACAAGCCCAAGATTCCCACGTTCAAAGAGGCAGCTTTGAA
TCTGCACGGTGACCTTCTTCCTGGCTGGAAAAACCCAAAGCATGGCCGCCAATGGATCAACACCTTGGAGGAGTACGTCT
TCCCGCGGCTTGGAGGGAAATTTCTTCATGAAATCCAACCTGGCGATGTTGCAGAGGTCCTGAAACCCATCTGGCTCACA
AAGGCAGAAACTGCTAGCCGGGTCAAACAGCGCATTCACGCTGTGATTGCTTGGGGTTGGGCTCACGGATACTGTCAATC
AAACCCAGTTGACGTTGTTGGACACCTGCTCGCGCAGCAGCCAGGCAAGGCTGTACGAACTCAGCATCATCCAGCTATGC
CATGGCGCGAGATTCCGAAGTTTGTGCAGGAACACCTCTGGCAAAGCACTCGACCAGAGGTGACGCGCACAATGCTTGAG
TTTGTAATCTTGACGGCCAGTCGCTCAGGGGAAGCACGAGGAATGCGCTGGAGCGAGCTTGATCTGAAGAACAAAGTATG
GACGATTCCTGCGGAGCGAATGAAAGCAAAGCTTCCCCATCGCCTTCCCCTCTCCCCACGTGCAATGACGTTAATTGAAA
GGCAGAAGGGCCAACATGAGAACCTTGTCTTTCCGTCGATTCGTGATCGGGTTGAGCTCTCGGATATGGCTCTGACTTCA
CTACTTCGAAAGCTGAAAGCACGGAGCGACACGCCAGGAAGAGTCGCGACGACCCATGGGTTTCGGTCCAGCTTTCGGGA
TTGGTGCAGCGAGATGGGCTACTCACGAGATCTGGCCGAGCGGTCCTTGGCCCACACCATCAAAGATAAAGTCGAAGCGG
CCTACCATCGCACCGATTTGTTGGAACAACGACGAGAGGTTATGAATGCTTGGGCAGCATTCGTATCTGGCAAGCTGTCT
TTAGGAATTGCATCAGAAAGCCCGATTTGA

Protein sequence :
MATITDTKARNIKPSDTAIPHGSVTGLALHPSNLKGHGKWVLRYVSPVSGKRRNAGLGSYPEISIAEVGKRATAMRIALA
EGKDPLEEKAKLEDKPKIPTFKEAALNLHGDLLPGWKNPKHGRQWINTLEEYVFPRLGGKFLHEIQPGDVAEVLKPIWLT
KAETASRVKQRIHAVIAWGWAHGYCQSNPVDVVGHLLAQQPGKAVRTQHHPAMPWREIPKFVQEHLWQSTRPEVTRTMLE
FVILTASRSGEARGMRWSELDLKNKVWTIPAERMKAKLPHRLPLSPRAMTLIERQKGQHENLVFPSIRDRVELSDMALTS
LLRKLKARSDTPGRVATTHGFRSSFRDWCSEMGYSRDLAERSLAHTIKDKVEAAYHRTDLLEQRREVMNAWAAFVSGKLS
LGIASESPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 4e-128 64
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 4e-128 64
int AAL08426.1 integrase Not tested SRL Protein 6e-129 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C380_06325 YP_006853613.1 P4-family integrase VFG0672 Protein 3e-129 64