Gene Information

Name : C380_06100 (C380_06100)
Accession : YP_006853569.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : transposase, IS4
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1327838 - 1328812 bp
Length : 975 bp
Strand : -
Note : COG3039 Transposase and inactivated derivatives, IS5 family

DNA sequence :
ATGAAGCAGCAGACCTTGGCAATGGCCGCAGATCAAGACAACGGATTCGAGCATTCGCGCAAACCCACCCGACGCGAAGA
GTTCTTGCGGACCATGGAGACAATAGTGCCATGGGCCGCTCTGTGCCAGGTGATAGAGCCGCACTACCCCAAAGCAGGCA
ACGGCCGCCCGCCCATTGGCCTTGAGCGCATGCTGCGCATCCATTTTCTTCAGCACTGGTTCAACCTGGCCGATCTGGCG
TGCGAGGAGGCTCTGTATGACAGTGCCAGTCTGCGCCGCTTTGTGGGGATTGACCTGGGCCGCGAACGCGTGCCCGACGC
CACCACGCTGCTGAAGTTTCGCAAACTGCTCAATGAGCAAAAACTGGGTGAAGCCCTGTTTGCCAAGGTAGGCCAGCAAT
TGCAGGAGCGCGGCTTCAAGGTCAACACCGGCACCATCGTGGATGCCACCATCATCGCCGCGCCCAGTTCTACCAAGAAC
GCCGACAAGGCGCGCGATCCCGATATGCACCAGACCCGCAAAGGCCAGCAGTGGTATTTCGGCATGAAGCTGCACATTGG
CGTGGACAGCCAAAGCGGGCTGGCGCACAGCGCCGTGGTGACGGCGGCCAACGTGCATGACAAACACCCGCTGCCCGATC
TGCTGCATGGCAACGAGCAGCGCGTGTACGGCGACTCGGCCTACGCCAGCCAGAAGGCTCTGATCCGGGGCAAGGCGCCC
CAAGCCAAAGACTTCACCAACCAGCGCACCCGCCGTGCAGGCGAGGTGGACGAAGTTCAGCGGGCCAAGAACCGCAACAA
GTCACGCATCCGCGCTCGGGTAGAGCATGTGTTCGGGGTGGTCAAGCGCCTGTGGGGATTCACCAAGGTGCGCTACCGCG
GGCTGCAGAAGAACGCCACACGCGCATTCACGGCCTTGGCGCTGGCCAACATTTTCCTTGCCCGAGGGCGACAGCAGGGA
CAGGTGCGCCCGTAA

Protein sequence :
MKQQTLAMAADQDNGFEHSRKPTRREEFLRTMETIVPWAALCQVIEPHYPKAGNGRPPIGLERMLRIHFLQHWFNLADLA
CEEALYDSASLRRFVGIDLGRERVPDATTLLKFRKLLNEQKLGEALFAKVGQQLQERGFKVNTGTIVDATIIAAPSSTKN
ADKARDPDMHQTRKGQQWYFGMKLHIGVDSQSGLAHSAVVTAANVHDKHPLPDLLHGNEQRVYGDSAYASQKALIRGKAP
QAKDFTNQRTRRAGEVDEVQRAKNRNKSRIRARVEHVFGVVKRLWGFTKVRYRGLQKNATRAFTALALANIFLARGRQQG
QVRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO33449.1 putative transposase Not tested Not named Protein 3e-53 48
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 2e-66 47
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 2e-50 44
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 2e-50 44