Gene Information

Name : PAC1_03970 (PAC1_03970)
Accession : YP_006850789.1
Strain : Propionibacterium acnes C1
Genome accession: NC_018707
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 825522 - 826121 bp
Length : 600 bp
Strand : +
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence : 
ATGACGAGTGTTGTCGGCTATGCGCGGGTGAGCACGCGCGAGCAGAACCCCGAGGCCCAGGAGGCCGAGCTGCGTGCGGC
AGGGGCGACGCGAGTGTTTGTCGATCGTGGCGAGTCGAGCCGCGTCAGGGACCGGCCGCAGTGGATCGCGTGCCTGGACT
ATCTGCGCGACGGTGACACGCTCGTGGTGCGCCGGCTGGATCGCATCGCCGGCAGCGAGAAGATGGCCATCGAGACGATC
AATGACTTAGCCGAGCGTGGTGTGAACATCCGGAGTCTGACCGAGCCGGACATCGACACGACAACCCCGATGGGTCGAGC
CCTGTTCGGTATCGTTGCCGTGTTTGCTCAGCTCCGAGTGGACACGATCCGGGAGAACACCCGGCGCGGTTTGGAGCACG
CCCGCGCCCAGGGGCGCGTCGGCGGTCGGCCCTCTGTGATGACCCCGAAGCGCGTCGCCGCTGCTGCGCAGATGCGCGGC
GAGGGAAAGACCCTCGCGCACATCGCGGCAGTGCTCGGAGTCGGCAAGTCGACGGTGGCTCGCGCGCTGGCCAAGCTGGA
CGAGGAGACCCCGGAGCGGGTCGGAGCTGCGAAGCCCTAA

Protein sequence : 
MTSVVGYARVSTREQNPEAQEAELRAAGATRVFVDRGESSRVRDRPQWIACLDYLRDGDTLVVRRLDRIAGSEKMAIETI
NDLAERGVNIRSLTEPDIDTTTPMGRALFGIVAVFAQLRVDTIRENTRRGLEHARAQGRVGGRPSVMTPKRVAAAAQMRG
EGKTLAHIAAVLGVGKSTVARALAKLDEETPERVGAAKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 6e-22 42
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 9e-22 42
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 9e-22 42
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 3e-17 41
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 5e-17 41
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 5e-17 41
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 3e-17 41
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 3e-17 41
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 3e-17 41