Gene Information

Name : PAC1_03060 (PAC1_03060)
Accession : YP_006850611.1
Strain : Propionibacterium acnes C1
Genome accession: NC_018707
Putative virulence/resistance : Virulence
Product : Thiol peroxidase, Tpx-type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 650672 - 651175 bp
Length : 504 bp
Strand : +
Note : COG2077 Peroxiredoxin

DNA sequence :
ATGGCTACTACCGCTTTCATGGGAAAACCCCTTAACACCGTCGGGGACCTTCCTCAGGTCGGTTCCTTGTTGCCGTCGTT
CGCTCTCGTCAAGAGTGACTTGTCGGAGCTGAGAAGCGATGAGTTGAAGGGCAAGAAGCTCGTCCTAAACATTTTCCCGA
GTGTGGACACCGGAGTGTGTGCAACGAGTGTGCGCACCTTCAACGAGAAAGCCGCTGGACTCGACGACACCATCGTCTTA
TGTGTTTCTCGTGACCTTCCATTCGCCCAGGCTCGCTTCTGCGGTGCGGAGGGCATCAAGAACGTCGTTGTCGCCTCGGC
CTTCCGCTCCCATTTTGGTAAGGACCTTGGCGTTACCCTCGCCGATGGCCCGATGCAGCATCTGCTCGCGCGCGCCATCA
TCGTCGTGAACGCTGAGGGAAAGGTTACCTACACCCAGCTCGTCGATGAGATCACTACCGAGCCGGATTACGACGCTGCC
CTCGAGGCTGCGTCCAAGGCCTGA

Protein sequence :
MATTAFMGKPLNTVGDLPQVGSLLPSFALVKSDLSELRSDELKGKKLVLNIFPSVDTGVCATSVRTFNEKAAGLDDTIVL
CVSRDLPFAQARFCGAEGIKNVVVASAFRSHFGKDLGVTLADGPMQHLLARAIIVVNAEGKVTYTQLVDEITTEPDYDAA
LEAASKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 7e-34 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-34 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 5e-34 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-34 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAC1_03060 YP_006850611.1 Thiol peroxidase, Tpx-type VFG0087 Protein 1e-34 47