Gene Information

Name : M3Q_476 (M3Q_476)
Accession : YP_006846802.1
Strain : Acinetobacter baumannii TYTH-1
Genome accession: NC_018706
Putative virulence/resistance : Resistance
Product : Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 508706 - 509923 bp
Length : 1218 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAGTTCGACAAAGATCGCATTGGTAATTACGTTACTCGATGCCATGGGGGTTGGCCTTATCATGCCAGTCTTGCC
AACGTTATTACGTGAATTTATTGCTTCGGAAGATATCGCTAACCACTTTGGCGTATTGCTTGCACTTTATGCGTTAATGC
AGGTTATCTTTGCTCCTTGGCTTGGAAAAATGTCTGACCGATTTGGTCGGCGCCCAGTGCTGTTGTTGTCATTAATAGGC
GCATCGCTGGATTACTTATTGCTGGCTTTTTCAAGTGCGCTTTGGATGCTGTATTTAGGCCGTTTGCTTTCAGGGATCAC
AGGAGCTACTGGGGCTGTCGCGGCATCGGTCATTGCCGATACCACCTCAGCTTCTCAACGCGTGAAGTGGTTCGGTTGGT
TAGGGGCAAGTTTTGGGCTTGGTTTAATAGCGGGGCCTATTATTGGTGGTTTTGCAGGAGAGATTTCACCGCATAGTCCC
TTTTTTATCGCTGCGTTGCTAAATATTGTCACTTTCCTTGTGGTTATGTTTTGGTTCCGTGAAACCAAAAATACACGTGA
TAATACAGATACCGAAGTAGGGGTTGAGACGCAATCGAATTCGGTATACATCACTTTATTTAAAACGATGCCCATTTTGT
TGATTATTTATTTTTCAGCGCAATTGATAGGCCAAATTCCCGCAACGGTGTGGGTGCTATTTACCGAAAATCGTTTTGGA
TGGAATAGCATGATGGTTGGCTTTTCATTAGCGGGTCTTGGTCTTTTACACTCAGTATTCCAAGCCTTTGTGGCAGGAAG
AATAGCCACTAAATGGGGCGAAAAAACGGCAGTACTGCTCGGATTTATTGCAGATAGTAGTGCATTTGCCTTTTTAGCGT
TTATATCTGAAGGTTGGTTAGTTTTCCCTGTTTTAATTTTATTGGCTGGTGGTGGGATCGCTTTACCTGCATTACAGGGA
GTGATGTCTATCCAAACAAAGAGTCATCAGCAAGGTGCTTTACAGGGATTATTGGTGAGCCTTACCAATGCAACCGGTGT
TATTGGCCCATTACTGTTTGCTGTTATTTATAATCATTCACTACCAATTTGGGATGGCTGGATTTGGATTATTGGTTTAG
CGTTTTACTGTATTATTATCCTGCTATCGATGACCTTCATGTTAACCCCTCAAGCTCAGGGGAGTAAACAGGAGACAAGT
TGTCAGTTCCACAAATAA

Protein sequence : 
MNSSTKIALVITLLDAMGVGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIG
ASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSP
FFIAALLNIVTFLVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYFSAQLIGQIPATVWVLFTENRFG
WNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQG
VMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQAQGSKQETS
CQFHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(B) AEQ20905.1 tetracycline resistance protein Not tested Tn6166 Protein 2e-166 99
tetA YP_005797160.1 tetracycline resistance protein, class G (TETA(G)) Not tested AbaR4e Protein 6e-163 99
BJAB07104_00277 YP_008207742.1 Permeases of the major facilitator superfamily Not tested AbaR25 Protein 2e-166 99
BJAB0868_00281 YP_008211607.1 Permeases of the major facilitator superfamily Not tested AbaR26 Protein 2e-166 99
tetA(B) AAL08445.1 tetracycline resistance protein TetA(B) Not tested SRL Protein 1e-162 99
tetB AEA34667.1 tetracycline resistance determinant Not tested Not named Protein 1e-162 99
tetA(B) AEZ06045.1 tetracycline efflux protein Not tested Tn6167 Protein 1e-162 99
ABZJ_00260 YP_005524216.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) Not tested AbaR22 Protein 1e-166 99
tetA(B) AFH57202.1 tetracycline resistance protein Not tested AbaR4a Protein 1e-166 99
tet(H) YP_005176248.1 tetracycline efflux protein, class H Not tested ICEPmu1 Protein 6e-77 54
tetA CAJ77034.1 Tetracycline resistance protein Not tested AbaR1 Protein 2e-84 51
tetA(G) AGK06974.1 TetA(G) Not tested SGI1 Protein 3e-81 51
tetA(G) AGK07104.1 TetA(G) Not tested SGI1 Protein 3e-81 51
tet(G) AAK02051.1 tetracycline resistance protein Not tested SGI1 Protein 3e-81 51
tetA(G) ABZ01843.1 TetA(G) Not tested SGI2 Protein 3e-81 51
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 2e-69 48
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 1e-69 48
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 1e-69 48
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 1e-69 48
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 7e-70 48
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 5e-70 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AB084246.gene.p01 Protein 7e-163 99
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) V00611.gene.p01 Protein 7e-162 99
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) NC_010558.1.6275971. Protein 6e-163 99
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) L06798.gene.p01 Protein 4e-91 62
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AJ250203.gene.p01 Protein 4e-82 58
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) L06940.gene.p01 Protein 3e-79 55
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) Y19116.gene.p01 Protein 3e-78 54
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) Y15510.gene.p01 Protein 9e-78 54
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) CP004022.1.gene2534. Protein 3e-78 54
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AF038993.gene.p01 Protein 2e-78 54
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AF133139.gene.p01 Protein 5e-83 51
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) NC_010410.6002612.p0 Protein 1e-84 51
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AF133140.gene.p01 Protein 1e-84 51
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) NC_011586.7045189.p0 Protein 4e-66 48
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) CP001485.1.gene2821. Protein 3e-70 48
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AF534183.gene.p01 Protein 3e-70 48
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) NC_010410.6002597.p0 Protein 3e-70 48
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) Y19114.gene.p01 Protein 1e-68 47
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) X75761.gene.p01 Protein 1e-69 47
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AF121000.gene.p01 Protein 2e-62 45
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AF070999.gene.p01 Protein 3e-67 45
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AY264780.2.gene3.p01 Protein 2e-62 44
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AJ420072.gene.p01 Protein 1e-58 44
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) AY743590.gene.p01 Protein 2e-59 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M3Q_476 YP_006846802.1 Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) VFG1036 Protein 6e-163 99