Gene Information

Name : AXY_23830 (AXY_23830)
Accession : YP_006846277.1
Strain : Amphibacillus xylanus NBRC 15112
Genome accession: NC_018704
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2538598 - 2540454 bp
Length : 1857 bp
Strand : +
Note : -

DNA sequence :
GTGCCCTTTATGTATCAAAATTATAACATGAATCAATTGGTTTTGCCTATAGATTTGGAAGTGAAACTTCAGGAAAATGA
TATTGCTTTTGTCATTAATGATTTAGTAGAGAGTATTCCTGAAGAAGCTTTTGAAAATTTTCTTCGAAAAACAGGTCGTC
CTTCATATCATCCACGAATGATGTTAAAAATAACATTATGTGCTTACTCTCAATCAGTATTTTCCGGCAGGAAAATCGAA
GCTCTCCTCAAAGACAGTATTCGTATGATGTGGCTTGCACAAGGTTATGAACCAAGTTATCGCACAATCAATCGTTTCCG
AGTCGATCCAGATGTACAAGAATTATTACGACAATTATTCATCCAATTTCGCTGTCAATTGGTTGAAGAAAAAATCATCG
ATCATGATGCAATATTTATTGATGGAACAAAAATTGAAGCTAATGCAAATAAATTTACTTTTGTATGGAAAAAAGCAGTT
AAAAATTATAGTGAGAAGTTAATCGAAAACTCAAATAAAATATATGATGAGCTACTTGAAAAAGAAATTATCCCGGAAAT
TAAACGTGAAAGTCCTGACGAACTTTCCATTACTGAACTTGAAGAAATAGCTGAAAGATTAGAAGAAACGGTGAACGATT
ATAATAAGAAAATTGAGGAATGTGAACTTGGAAGTGAACGTAAAAGAATTCGTTCAGAGAGAAAGTTTCCTAAGCAAGCA
TTGAAACGAATAAAGGACTTTATTGATCGAAAGAAGAAATACGCACAAGATATGGATATATTTGGAGAAAGAAACAGTTA
TTCTAAAACCGATCATGATGCTACTTTTATGCGTATGAAAGATGACTATATGAGGAATGGACAATTGAAGCCTGGATACA
ATGTTCAAATCGCAACAGAAGGTCAATACACGCTTGCTTACGATGTTTTTCCAAATCCAACGGATACACGTACATTCATT
CCTTTTTTAGATAAAATTGAAAAGCACTTTTTTGATTTACCTGACTATATCGTCGCTGATGCTGGATATGGTAGTGAACA
AAATTATCATGATGTTTTAGAGAATCGCAACCGGACACCTCTTATTACATATAACAGTTATAGGAAAGAGCAGAAAAGAA
AATATAAGAATGATCCATTTAAGACGGACAATTGGGAGTACAATGGAGAGCATGACTATTACGTTTGTCCGAACGGACAA
AAATTAACTTTCCAGTACTTTTTTAATCGTACAGATCGTTATGGATTTACAAGGGAATTTAGGGTATATCAATCTGAAAA
TTGTAATGATTGTCCATTACGCTCTCATTGCACAAAAGCAAAAGAGGGGAACAATCGAAGGTTGTTTATTAATAAAAAGT
GGGAAGAGCAAAAAGAATATATAAGAACTAAGCTTTCGGAAGAAGAAACTGGAGACATTTATAAAAAACGCAAAATAGAT
GTTGAACCAGTTTTTGGATTCTTGAAGGCTAATTTGTCGTTCACTCGATTTTCCGTTAGAGGAAAATCGAAAGTAGAAAA
TGAATTAGCATTTGCCTTAATGGCAGTAAACTTAAGAAAGTATACCGCCAAAATCCAAAATGAAAATAATCCTAACAATC
CAAAACAAAATAGAAATTGCGGAAACAACAATTCAATGTTGATTCCGCAATTTTTCTCATCTAAGACTGGTTATGTCCCA
GCCTCAGTTGAACTTGAAATACTTATTTCACTCGGTATACATTTCTTACTTCGTTTGTTTGTGTTCGATCTGGACCAACA
GAGAAAATGGACAATGGAATCTGAGTTAGCTGTGAGATTCGCTCGATGTAATGACGTGCATTTACAGGTAATTCATCTAA
AGTTCGTACACCCGTAA

Protein sequence :
MPFMYQNYNMNQLVLPIDLEVKLQENDIAFVINDLVESIPEEAFENFLRKTGRPSYHPRMMLKITLCAYSQSVFSGRKIE
ALLKDSIRMMWLAQGYEPSYRTINRFRVDPDVQELLRQLFIQFRCQLVEEKIIDHDAIFIDGTKIEANANKFTFVWKKAV
KNYSEKLIENSNKIYDELLEKEIIPEIKRESPDELSITELEEIAERLEETVNDYNKKIEECELGSERKRIRSERKFPKQA
LKRIKDFIDRKKKYAQDMDIFGERNSYSKTDHDATFMRMKDDYMRNGQLKPGYNVQIATEGQYTLAYDVFPNPTDTRTFI
PFLDKIEKHFFDLPDYIVADAGYGSEQNYHDVLENRNRTPLITYNSYRKEQKRKYKNDPFKTDNWEYNGEHDYYVCPNGQ
KLTFQYFFNRTDRYGFTREFRVYQSENCNDCPLRSHCTKAKEGNNRRLFINKKWEEQKEYIRTKLSEEETGDIYKKRKID
VEPVFGFLKANLSFTRFSVRGKSKVENELAFALMAVNLRKYTAKIQNENNPNNPKQNRNCGNNNSMLIPQFFSSKTGYVP
ASVELEILISLGIHFLLRLFVFDLDQQRKWTMESELAVRFARCNDVHLQVIHLKFVHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 1e-105 54
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 3e-108 54
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 3e-108 54
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 3e-108 54
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 2e-108 54
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 6e-104 52
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 2e-118 52