Gene Information

Name : ssb (AXY_01940)
Accession : YP_006844088.1
Strain : Amphibacillus xylanus NBRC 15112
Genome accession: NC_018704
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 196707 - 197162 bp
Length : 456 bp
Strand : +
Note : -

DNA sequence :
ATGTTAAACAGAGTTGTACTTGTAGGACGATTAACAAGAGATCCAGATCTAAGGTATACAGCCAGTGGTAGAGCTGTTGC
AAACTTTACTATCGCGGTAAATAGGCCATTTACTAACCAACAAGGAGATAAAGAAGCTGATTTTATAAATTGTGTCATCT
GGAATAAGCCAGCTGAAAACTTAGCTAATTACATGAGTAAGGGAAATTTGATCGGTATTGATGGCAATTTGCAATCAAGA
AGTTATGACGGACAAGACGGAAAACGAGTTTTTGTAACTGAAGTAGTAGCAGGATCAGTTCAATTTTTAGAATCAAAGAA
TAAAACTGCTAGTAATCAAAACAATAACCAAGTCATGAAGCAAACGCAAAATAACGCAAATGAAAACGATGCAGCGTTTC
AATACCACGAACATATTGAACCGATTGATATTTCAGATGATGAGTTGCCTTTTTGA

Protein sequence :
MLNRVVLVGRLTRDPDLRYTASGRAVANFTIAVNRPFTNQQGDKEADFINCVIWNKPAENLANYMSKGNLIGIDGNLQSR
SYDGQDGKRVFVTEVVAGSVQFLESKNKTASNQNNNQVMKQTQNNANENDAAFQYHEHIEPIDISDDELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-33 69
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 8e-33 69
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 8e-33 67
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 3e-31 66
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-34 64
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-34 52
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-35 52
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-35 52
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 4e-35 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-35 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-35 51
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 6e-31 49
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 7e-36 49
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-35 49
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 1e-26 47
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-26 47