Gene Information

Name : AXY_20090 (AXY_20090)
Accession : YP_006845903.1
Strain : Amphibacillus xylanus NBRC 15112
Genome accession: NC_018704
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2101905 - 2103731 bp
Length : 1827 bp
Strand : -
Note : -

DNA sequence :
ATGTCATATCGCAAGCGACTTATCTCACTTATATTGCTTGACTCACTTATGATTGCAACAGCTATATTCCTAGCGGCATG
GGTTGTTTATCCTGCACGATCAGATTGGGATACTAATATCGTATGCTTTAGCGCAATCGGACTATTAATCTTTCATTTTA
TCTATGCTTTAATTTTTAAACTCTATCATAAGATTTGGGCATATGCGAGTGTTAAAGAATTAAAAGCGATTATCTACTCT
GTTACATTAGCGAATCTATCAACAGCAGTTTTCCAGTACTTCATTAATGATTTTAAGATTTATCGCCGGGCAATGCTCGT
TACGTGGCTCATTCATTTAACTGTGATCGGTGGTTCACGCTTTATTTGGCGGGTTTTCCGAGATCACTATATTAATCCAA
ATCCAAATCGAAAGCGTACATTAATTATTGGTGCAGGTGATGCGGGAGCGATGATCGCCAGACAACTTACAAACGGGCAA
ACAGACGTAGACTTAAACCCAATTGGATTTGTTGATGATGATCCGATGAAGCAAAAAATGCACGTCTTTAATCTACCTGT
CCTAGGTACGACTGAAGAAATCGAAGCAATCGTTGAAGCCAAGCAAATTGAACATATAATTATTGCCATACCATCAATTC
GAAATGGTGAACTTAAGGCAATTATTAATCGTTGTAATAACACAGCGAAGAAGGTACAAATTTTGCCGAAACTTGAAGAC
CTTGCGACTGGTCGTGTATCGGTTAAAATGTTAAGAAATATCGACGTGGAGGATGTCCTCGGACGTCCACCGGTAGAGCT
TGATATCGATGCAATCTCAACATATGTGACTGACAATACCGTTATGGTAACAGGTGCAGGAGGATCGATCGGGTCGGAGA
TTTGCCGTCAGCTGATGCGCTTTAATCCGTCAAGAATTCTATTAGTCGGCCATGGTGAGTTTAGTATTTATACAATCGAA
AAAGAATTACAGAAGACATACGGACATACGACTACTGAAATTATTCCACTTATAGCTGATGTCCAAGACCGTGACCGAAT
CTTTAATATTGTAAAACAATATCAACCGTGGATTATCTATCATGCAGCTGCACATAAGCATGTGCCACTCATGGAATATA
ATCCACATGAAGCGATTAAAAACAATGTCATCGGAACGAAAAATGTTGCAGAAGCAGCCGATGTATTCAATGTTCATACA
TTTGTTTTAGTCTCAACGGATAAAGCCGTTAACCCAACTAACGTTATGGGCGGTACAAAACGTATTGCAGAAATGATCAT
CCAAGACCTTGCGACACGAAGTAAAACGAAATTCGTTGCCGTCCGTTTTGGTAATGTACTAGGTAGCCGTGGCTCAGTTA
TCCCACTATTTAAAGAACAAATAGCAGAAGGTGGACCAGTTACAGTCACACACCCAGAGATGACACGTTATTTTATGACG
ATACCAGAAGCGACAAGACTTGTGATTCAAGCAGGCACACTTGCAAATGGTGGAGAAATTTTCGTCCTCGATATGGGCGA
GCCTGTTAAAATTGTTGACCTGGCAAAAAATATGATCAACCTATCAGGCTATTCAACTGATGACATTGAAATTAAATTCA
CTGGTATTCGACCAGGTGAGAAAATGTACGAAGAACTACTTAATAAGGATGAAATTCATCCAAGAGAAGTATACGAGAAG
ATATATATCGGCAAAACAGACCAAGTTGACATTAATCCAGTCTTACAGCTAATCGACACATTTGAGCAATTTGATAATGT
TCAAGTTAAAGACGCCATTATGGACATCGTTTTTGCCGAACAAAAGATCAAAACTAGCATTTCTTAA

Protein sequence :
MSYRKRLISLILLDSLMIATAIFLAAWVVYPARSDWDTNIVCFSAIGLLIFHFIYALIFKLYHKIWAYASVKELKAIIYS
VTLANLSTAVFQYFINDFKIYRRAMLVTWLIHLTVIGGSRFIWRVFRDHYINPNPNRKRTLIIGAGDAGAMIARQLTNGQ
TDVDLNPIGFVDDDPMKQKMHVFNLPVLGTTEEIEAIVEAKQIEHIIIAIPSIRNGELKAIINRCNNTAKKVQILPKLED
LATGRVSVKMLRNIDVEDVLGRPPVELDIDAISTYVTDNTVMVTGAGGSIGSEICRQLMRFNPSRILLVGHGEFSIYTIE
KELQKTYGHTTTEIIPLIADVQDRDRIFNIVKQYQPWIIYHAAAHKHVPLMEYNPHEAIKNNVIGTKNVAEAADVFNVHT
FVLVSTDKAVNPTNVMGGTKRIAEMIIQDLATRSKTKFVAVRFGNVLGSRGSVIPLFKEQIAEGGPVTVTHPEMTRYFMT
IPEATRLVIQAGTLANGGEIFVLDMGEPVKIVDLAKNMINLSGYSTDDIEIKFTGIRPGEKMYEELLNKDEIHPREVYEK
IYIGKTDQVDINPVLQLIDTFEQFDNVQVKDAIMDIVFAEQKIKTSIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-136 56
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-136 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AXY_20090 YP_006845903.1 polysaccharide biosynthesis protein VFG1300 Protein 2e-132 53
AXY_20090 YP_006845903.1 polysaccharide biosynthesis protein VFG0029 Protein 7e-82 42