Gene Information

Name : smpB (AXY_18240)
Accession : YP_006845718.1
Strain : Amphibacillus xylanus NBRC 15112
Genome accession: NC_018704
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1897343 - 1897810 bp
Length : 468 bp
Strand : -
Note : protein synonym:tmRNA-binding protein

DNA sequence :
ATGATGCCCAAGAATAAAAGTCACGCAATTGCACAAAATAGAAAAGCTTCTCACGATTATTTTATTGAAGAAACCTATGA
AGCGGGTATTGTACTACAAGGGACAGAAATTAAGTCGATTCGAGCAGGACGTGTCAATATGAAAGATAGCTTTGCCCGTG
TAGAGCGCGGTGAGGTCTTTTTACACAACCTTCACATTTCACCGTATGAGCAAGGTAATCGATATAATCATGAACCAACT
CGAACAAGAAAATTACTTTTACACAGACGACAAATTAATAAATTAATTGGTGAAACTCAACAAGCTGGTTATTCATTAGT
TCCATTAAAAATTTATATTAAAAATGGTGTTGCTAAAGTGTTAATTGGCTTAGGTAAAGGTAAGAAACAATATGATAAAC
GTGAGGATTTAAAGAGAAAGCAAGCTAAACGTGAGGTTGACCGTGCGCTTAAAGATAGTCTGCGCTAG

Protein sequence :
MMPKNKSHAIAQNRKASHDYFIEETYEAGIVLQGTEIKSIRAGRVNMKDSFARVERGEVFLHNLHISPYEQGNRYNHEPT
RTRKLLLHRRQINKLIGETQQAGYSLVPLKIYIKNGVAKVLIGLGKGKKQYDKREDLKRKQAKREVDRALKDSLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-43 63
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 6e-34 50
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 9e-29 45