Gene Information

Name : cadA (AXY_01610)
Accession : YP_006844055.1
Strain : Amphibacillus xylanus NBRC 15112
Genome accession: NC_018704
Putative virulence/resistance : Resistance
Product : cadmium-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.3
Position : 159902 - 162034 bp
Length : 2133 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGATCAACAAGCAAAATTATCGGAACAAGAAATGAAAGCTTATCGAGTTCAGGGATTTACCTGTACAAGCTGTGC
AAATATCTTTGAAAATAACGTAAAAAAATTACAAGGAGTTGAAGATGCTAAAGTAAACTTTGGGGCATCTAAAATCTATG
TTCACGGAAGTACAACGATTGAGGAATTAGAAAAAGCAGGTGCTTTTGAAAATTTAAAGATTCGAGATGAAAAAGAACAA
AAAATAGAACGTGAATCGTTTTGGAAACAGAAAGCAAATATTAAAGTTTATATCTCAGCTATATTGCTTGTTATGAGTTG
GTTGTTGGGCGAGCAATATGGGGAAGGTCATATTCTTCCAACGATTGGTTTTGCAGCAGCCATCTTAATTGGTGGATATT
CATTATTTATTAAAGGATTTAAAAATTTAAGCAGATTTAAGTTCGATATGAATACGCTAATGACTATTGCCATTCTAGGA
GCCGCGGTGATTGGTCAATGGGGAGAAGGGGCAATGGTTGTTATCCTGTTCGCTATAAGCGAAGCGTTAGAGCGCTATTC
AGTAGACAAGGCTAGGCAATCCATTGAATCGTTAATGGATATCGCTCCAAAAGAAGCACTAATTCGTCGTGAAAATAAAG
AAATGCAAGTACACGTTGAAGATATTCTAGTGGGCGATATTATGATCGTAAAACCTGGCCAAAAGTTAGCGATGGACGGA
ACAGTTATTCAGGGTATATCGACATTAAATCAGGCCGCCATTACAGGAGAAAGTGTTCCAGTAACCAAAACTGTTGGTGA
TGAAGTCTTTGCAGGAACATTGAATGAGGAAGGATTACTAGAAGTAAAAGTAACAAAAAAGGTAGAAGACACCACGATAT
CAAAAATCATTCATTTGGTAGAAGAAGCCCAAGCAGAACGAGCACCTTCTCAAGCGTTTGTCGATAGATTTGCACAGTAC
TATACACCAGCTATTGTCGTCTTGGCTCTTTTAATCGCTGTTGTTCCCCCTTTACTATTTGGAGCTGATTGGAGCATGTG
GGTCTATCAAGGCTTGGCTGTGTTAGTAGTTGGTTGTCCTTGTGCTCTAGTTGTTTCAACACCTGTTGCTGTAGTTACTG
CAATAGGAAATGCAGCTAAAAATGGTGTTTTAATTAAAGGTGGCATCCACTTGGAAGAAGCAGGAGCTCTAAAAGCAATT
GCTTTCGATAAAACTGGAACATTAACAAAAGGTGTTCCAGCCGTAACGGACATTATAACGTATAGTGGAAATGAAAATGA
ATTAATGACTATTACAGCAGCTATTGAAAAGGGATCACAGCATCCACTTGCTTCAGCAATTATGAGAAAAGCAGAAGAAA
ACAGTTTGGACTTTAATGGAGTATTGGTTGAAGATTTTCAATCTATTACAGGTAAAGGCGTAAAAGCAAAAGTAAATAAT
GAATTATATTATGTAGGCAGTCCAAATCTTTTTGAAGAAGTACATGGAAGCATTGAAAGGAATCAAGAACGACAGATTAT
TGAAATGCAGACGCAGGGAAAAACAGTCATGGTGTTAGGAACGGAACAAGAAATCCTTTCTCTTATTGCAGTGGCAGATG
AAATAAGAGAAACATCAAAAGATGTCATCAGTAAATTGAACAGCATTGGAATTGAAACAGTGATGCTGACAGGTGATAAC
CAAAGGACAGCAGTAGAGATTGGAAAACAAGTCGGTGTTTCAGATATTAAAGCAGATTTGCTTCCAGAAGATAAATTGAA
TTTCATTAAAGAACTTCGTGGAAAGCATAAAAGTGTGGGAATGGTTGGAGATGGCGTGAATGATGCACCTGCTCTTGCAG
CTTCCACTGTTGGTGTGGCAATGGGTGGTGTTGGAACTGATACAGCACTAGAAACAGCTGATATTGCTTTAATGTCAGAT
GATTTAAAACAATTACCATATACCATTAATTTAAGCCGTAAGGCTTTGACGATTATAAAACAAAATATTACCTTCTCATT
GGTAATTAAATTAGTGGCATTGCTGTTAGTTATACCTGGTTGGTTAACGCTATGGATAGCGATATTTTCCGATATGGGAG
CAACATTACTTGTAACACTAAACAGTTTAAGGTTATTGAAAAGGAAAGAATAA

Protein sequence :
MSDQQAKLSEQEMKAYRVQGFTCTSCANIFENNVKKLQGVEDAKVNFGASKIYVHGSTTIEELEKAGAFENLKIRDEKEQ
KIERESFWKQKANIKVYISAILLVMSWLLGEQYGEGHILPTIGFAAAILIGGYSLFIKGFKNLSRFKFDMNTLMTIAILG
AAVIGQWGEGAMVVILFAISEALERYSVDKARQSIESLMDIAPKEALIRRENKEMQVHVEDILVGDIMIVKPGQKLAMDG
TVIQGISTLNQAAITGESVPVTKTVGDEVFAGTLNEEGLLEVKVTKKVEDTTISKIIHLVEEAQAERAPSQAFVDRFAQY
YTPAIVVLALLIAVVPPLLFGADWSMWVYQGLAVLVVGCPCALVVSTPVAVVTAIGNAAKNGVLIKGGIHLEEAGALKAI
AFDKTGTLTKGVPAVTDIITYSGNENELMTITAAIEKGSQHPLASAIMRKAEENSLDFNGVLVEDFQSITGKGVKAKVNN
ELYYVGSPNLFEEVHGSIERNQERQIIEMQTQGKTVMVLGTEQEILSLIAVADEIRETSKDVISKLNSIGIETVMLTGDN
QRTAVEIGKQVGVSDIKADLLPEDKLNFIKELRGKHKSVGMVGDGVNDAPALAASTVGVAMGGVGTDTALETADIALMSD
DLKQLPYTINLSRKALTIIKQNITFSLVIKLVALLLVIPGWLTLWIAIFSDMGATLLVTLNSLRLLKRKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 65
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 64
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA YP_006844055.1 cadmium-transporting ATPase BAC0298 Protein 9e-115 47
cadA YP_006844055.1 cadmium-transporting ATPase BAC0092 Protein 8e-92 42