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Name : clpC (AXY_00970) Accession : YP_006843991.1 Strain : Amphibacillus xylanus NBRC 15112 Genome accession: NC_018704 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 109187 - 111622 bp Length : 2436 bp Strand : + Note : - DNA sequence : ATGATGTTTGGAAGATTTACAGAGAGAGCGCAAAAAGTGTTGGCATTATCACAAGAAGAAGCGATCCGATTAGGTCACCA CAATATTGGGACAGAGCATATTTTACTTGGTCTTATTCGAGAAGGAGAAGGGATTGCGGCTAAAGCACTCCATGCGCTTA ACTTAGAAAAGGATAAAATCCAAGAAGAAGTTGAAGCATTAATTGGCGTAGGCAGTCAAACATCTCAAGCGCTCCACTAT ACGCCACGCGCAAAAAAGGTCATTGAATTATCTATGGATGAAGCAAGAAAGTTAGGTCACACCTATGTTGGAACAGAACA TATTTTACTTGGATTAATTCGAGAGGGCGAAGGGATTGCAGCAAGAGTTTTAAACAATTTAGGTGTTAGTCTAAACAGGG CAAGACAGCAAGTATTACAGCTTTTAGGTAGTAATGAATCTGTCCGAAAAGGTCAAGCAAGACATACCCAAAGTAACCCA GCAAGTACACCAACGCTAGACTCTTTAGCGCGTGATCTAACTCAGACGGCAAGAGAAGGTAATGTAGACCCTGTCATCGG TCGTGAGAAGGAAATTGAACGCGTCATTCAAGTATTAAGTCGTCGTACTAAGAACAACCCTGTATTAATTGGAGAGCCAG GTGTCGGAAAAACAGCGGTAGCAGAAGGCTTAGCCCAGCAAATAGTAAATAATGAAGTTCCTGAAACATTACGAGATAAG CGTGTTATGACACTCGATATGGGAACGGTAGTAGCGGGGACAAAATACCGTGGTGAATTCGAGGACCGTTTGAAAAAGGT TATGGAAGAAATTCGCCAAGCAGGAAATGTTATTTTATTTATTGATGAGTTGCATACATTGATTGGTGCAGGTGGTGCTG AAGGTGCAATTGATGCTTCAAATATATTAAAACCTTCGTTAGCCCGTGGAGAATTACAGTGTATCGGTGCAACAACGATT GACGAGTATCGAAAGTATATTGAAAAAGATGCAGCATTAGAGCGTAGGTTTCAACCGATTCGAGTTGATGAGCCAACTGT AGAGGAGTCAATTGAAATTCTCAAGGGACTCCGTGATCGATATGAAGCACATCATAGAGTTACAATTACAGATGAAGCAA TTGAAGCAGCTGCTCATTTATCAAGTCGTTATATTACGGATCGCTTTTTACCAGATAAAGCGATTGATTTAATCGATGAA GCTGGATCAAGGGTTCGCCTGCGTTCTTATACAGCTCCGTCAAATTTAAAAGAGTTAGAGAACAAACTAACGGAAATTAG AAAAGAGAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCAGCGGCACTACGTGATCAAGAACAAAAACTGAAAA AAGAATTAGAACTAACAAAAGAAAAGTGGCAAGAGAAGCAAGGGAAAGAAGATTCGAGAGTTGTTGTTGAAGATATTGCT TCAGTTGTATCAAATTGGACTGGTGTGCCAGTAGACTCGTTAACAAAAGATGAAGCGGATCGTCTGTTAAATTTAGAGTC CATCTTACATGGTCGCGTAATTGGCCAGTCTGAAGCCGTTACAGCAGTTTCTAAAGCTATTAGACGTGCTCGAGCTGGGT TAAAAGATCCGAAGCGTCCAATTGGTTCATTTATCTTTTTAGGACCAACAGGAGTTGGGAAAACGGAACTAGCGCGTGCA TTAGCTGAGGCAATGTTTGGTGATGAAGATGCAATGATTCGTATTGACATGTCTGAATATATGGAAAAGCATACGACATC TCGTTTAGTTGGATCTCCTCCGGGATATGTAGGGTATGAAGAAGGTGGCCAATTGACTGAGAAAGTCCGTAGTAAACCAT ATTCTGTTGTCTTACTTGACGAGATTGAAAAAGCACATCCAGAAGTGTTTAATATTCTGTTACAAGTATTAGAAGATGGC CGATTAACTGATTCAAAAGGAAGGCTCGTTGACTTTAGAAATACAGTTCTCATCATGACATCAAATGTTGGAGCAAGCGA ATTGCAGAAAAATAAATTTGTTGGCTTTAATATTGATGATCACCAAACAGACCATAAGCAAATGAAAGCTAATGTTACAG ATGCTCTGAAAAAAGCATTTAGACCAGAGTTCTTAAACCGCATCGATGAAACAATCGTATTTCATGCGCTTGAGCGTGGT CATATGAAGGATATTGTGACATTAATGGTTCGCCAACTTCAAGATCGTCTTGTTAAACAGGGCTTAGACTTTACAATCTC AAATAAAGCGATCGAAAAAATTGCAGAAGAAGGCTTTGATCCAGAGTATGGAGCGCGTCCATTACGTCGATCAATCCAAA AAAATATTGAAGATCTTTTATCTGAAGCATTGCTAAGAGGAGAGATCAACAAGAACGAAACAATTCGGATTGGATTAAGT AGTAATGGTAAATTTATTATTTTAAATAAGCAGTAA Protein sequence : MMFGRFTERAQKVLALSQEEAIRLGHHNIGTEHILLGLIREGEGIAAKALHALNLEKDKIQEEVEALIGVGSQTSQALHY TPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGIAARVLNNLGVSLNRARQQVLQLLGSNESVRKGQARHTQSNP ASTPTLDSLARDLTQTAREGNVDPVIGREKEIERVIQVLSRRTKNNPVLIGEPGVGKTAVAEGLAQQIVNNEVPETLRDK RVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTI DEYRKYIEKDAALERRFQPIRVDEPTVEESIEILKGLRDRYEAHHRVTITDEAIEAAAHLSSRYITDRFLPDKAIDLIDE AGSRVRLRSYTAPSNLKELENKLTEIRKEKDAAVQSQEFEKAAALRDQEQKLKKELELTKEKWQEKQGKEDSRVVVEDIA SVVSNWTGVPVDSLTKDEADRLLNLESILHGRVIGQSEAVTAVSKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARA LAEAMFGDEDAMIRIDMSEYMEKHTTSRLVGSPPGYVGYEEGGQLTEKVRSKPYSVVLLDEIEKAHPEVFNILLQVLEDG RLTDSKGRLVDFRNTVLIMTSNVGASELQKNKFVGFNIDDHQTDHKQMKANVTDALKKAFRPEFLNRIDETIVFHALERG HMKDIVTLMVRQLQDRLVKQGLDFTISNKAIEKIAEEGFDPEYGARPLRRSIQKNIEDLLSEALLRGEINKNETIRIGLS SNGKFIILNKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-94 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006843991.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 75 |
| clpC | YP_006843991.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 4e-154 | 52 |
