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Name : pilB (AXY_10030) Accession : YP_006844897.1 Strain : Amphibacillus xylanus NBRC 15112 Genome accession: NC_018704 Putative virulence/resistance : Virulence Product : type IV fimbrial assembly protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1056511 - 1058127 bp Length : 1617 bp Strand : + Note : - DNA sequence : ATGGCTACTCGACAAAAGCGTAAGCTTGGTGATATTTTAAAAGAGGCTAATCTGATTACAGAAGCTGAGATTCTTGAAGC TTTAGAGAAAAAGAAGGATCGCCAGAAATTAGGTGACGCGCTAGTTGAACAAGGGTACATTACTGAAAAGCAATTAATTG AAGTATTAGAGATCCAGTTAGGAATTGCCACTATATCTTTATATCGCTATCCAATTGATGAGCAATTGGTTGAATTAGTT CCAAAAGAAGTTGCGCGTTCAAATATTTTAATTCCACTTGAGTTACAGGATCATACGTTAACCGTAGCAATGAATGATCC ATTAGACTATTTTGCTATTGATGATTTAGAACTATTAACTAGCTATAATGTCAAACCAGTAATGGCGACAAAAGAAGATA TTTTACAAGCAATTAATAAATATTATGATAAAGGAAAAATTGATCAAAATGATGATGACCAAGCACCAGCAATTCAAATT TTAGATCAAATCCTTCAAACGGGTGTAACTTTAAGAGCAAGTGATGTTCACTTAGATCCAACTGAGGCGAATGTAAATGT TCGGTATCGTGTTGATGGCACACTTCGTAGTGATCGTACCCTCCCTAAACGAATTCAAAATGCGTTAATTGCTCGCGTGA AAATCTTAGCCAATTTAAACATAACTGAAACGCGTTTACCTCAAGATGGTCGAATTCGTATGGTTATTGATGGAAAGCCG ATTGATCTACGTGTTTCAACGCTACCTACTGTATTTGGCGAAAAAGTCGTTATCCGAATTCTCGATCTAACGAATATTTT TAAAAAACTAACAGAATTAGATTTTAATCAAAAAACGCTTGAGCAATATTCAGAAATCATTAAGCGTCCTTCAGGATTAA TTTTATTAACGGGTCCAACAGGGTCAGGAAAAACAACAACACTTTATGGCTCAATTAATGAACTCAATCAAGAAGGTGTT AATATTATTACAGTTGAAGATCCAGTAGAGTATCAACTTGAAGGAATTAATCAAGTACAGGTTAATTCAAATGTAGGCTT AACTTTCGCGGCAGGATTACGTTCAATTTTAAGACAAGACCCTAACATTATAATGGTTGGTGAAATTCGAGACAAAGAAA CGGCAGAAATCGCAATTCGTTCATCTCTGACAGGTCACTTAGTATTCAGTACTTTACATACTAATAGTGCGATTGATGCC ATTCCACGATTATTTGATATGGGGATTGAACCGTACTTGGTCGTTTCATCATTAACAGGGGTTATGGCACAGCGTTTAGT GAAAAAGATATGTAAAGATTGTAAAACAACACGCCCAGCTGCTCCATTAGAAGCCGAGATATTCGAAAAACGAGGTATTG AAATTAGTGTGCTATCTGAAGGAAAAGGCTGTAACAGTTGTCGTGGCACAGGTTATCGTGGAAGAATGGCCATTCATGAA TTATTAATTATTGATGAAACGATTAAAAAGATGATGCTTGAACGCGTCAGTATGAGTGAAATTAAAGAACATGTAAAAGA GCAAGGAATGGCGTTCTTAATTGATGATGGCTTAGCAAAAGCTAAACAAGGCTTTACAACATTAGAAGAAGTCATGCGTG TAGCAATTGTAGAATAG Protein sequence : MATRQKRKLGDILKEANLITEAEILEALEKKKDRQKLGDALVEQGYITEKQLIEVLEIQLGIATISLYRYPIDEQLVELV PKEVARSNILIPLELQDHTLTVAMNDPLDYFAIDDLELLTSYNVKPVMATKEDILQAINKYYDKGKIDQNDDDQAPAIQI LDQILQTGVTLRASDVHLDPTEANVNVRYRVDGTLRSDRTLPKRIQNALIARVKILANLNITETRLPQDGRIRMVIDGKP IDLRVSTLPTVFGEKVVIRILDLTNIFKKLTELDFNQKTLEQYSEIIKRPSGLILLTGPTGSGKTTTLYGSINELNQEGV NIITVEDPVEYQLEGINQVQVNSNVGLTFAAGLRSILRQDPNIIMVGEIRDKETAEIAIRSSLTGHLVFSTLHTNSAIDA IPRLFDMGIEPYLVVSSLTGVMAQRLVKKICKDCKTTRPAAPLEAEIFEKRGIEISVLSEGKGCNSCRGTGYRGRMAIHE LLIIDETIKKMMLERVSMSEIKEHVKEQGMAFLIDDGLAKAKQGFTTLEEVMRVAIVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-89 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-89 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_006844897.1 | type IV fimbrial assembly protein PilB | VFG0182 | Protein | 4e-87 | 48 |
| pilB | YP_006844897.1 | type IV fimbrial assembly protein PilB | VFG1876 | Protein | 9e-83 | 47 |
| pilB | YP_006844897.1 | type IV fimbrial assembly protein PilB | VFG2048 | Protein | 3e-90 | 46 |
| pilB | YP_006844897.1 | type IV fimbrial assembly protein PilB | VFG0233 | Protein | 4e-80 | 46 |
| pilB | YP_006844897.1 | type IV fimbrial assembly protein PilB | VFG2426 | Protein | 3e-79 | 43 |
