Gene Information

Name : BN406_00972 (BN406_00972)
Accession : YP_006839843.1
Strain : Sinorhizobium meliloti Rm41
Genome accession: NC_018700
Putative virulence/resistance : Resistance
Product : chloramphenicol O-acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 988910 - 989560 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGCCACCCATCCATTCCGCGCCTGATCCAGGCGCCGCCTTTCCCGTCGCCGAGTTCCCGCGCATCGGATTTCTCAGGAA
CATCGTGCGCTCGCCACTGATCGAGGCCGGCGAGTTCAGCTATTACGACGATCCGGACGGTCCCGAGCGCTTCGAAGAGA
AGTGCGTTCTCTATCACTATGACTTCGTGGGCGATCGGCTGGTGATCGGCCGCTTCTGTGCGCTGGCGACCGGCATACAG
TTCATCATGAACGGGGCCAACCACGCGACCGGAGGCTTCTCGACCTTTCCGTTCGGCATCTTCCCCGGTGCCTGGCGCGA
TGGCTTCGACCCTGACGCCTACAGGACCGGTTATCGTGGCGACACGACCGTCGGAAACGATGTCTGGATCGGCATGGAGG
CGACCATTTTGCCGGGCGTGACGATCGGCGATGGCGCGATCGTTGCGGCAAAAGCGGTCGTTACGAAGGATGTGCCTCCC
TATGCCGTCGTCGCGGGCAATCCCGCACGGGTGGTGAGATTGCGCTTCCCCGATGCGACGATCGAGCGATTGCAGGCGAT
TGCCTGGTGGCGTTGGCCGATCGACAAGGTGACGCGCAACATCGCGGCGATAACCGGCGCCGATCTCGATGCACTGGAAG
GCGCCCGGTAG

Protein sequence : 
MPPIHSAPDPGAAFPVAEFPRIGFLRNIVRSPLIEAGEFSYYDDPDGPERFEEKCVLYHYDFVGDRLVIGRFCALATGIQ
FIMNGANHATGGFSTFPFGIFPGAWRDGFDPDAYRTGYRGDTTVGNDVWIGMEATILPGVTIGDGAIVAAKAVVTKDVPP
YAVVAGNPARVVRLRFPDATIERLQAIAWWRWPIDKVTRNIAAITGADLDALEGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN406_00972 YP_006839843.1 chloramphenicol O-acetyltransferase NC_002516.2.878374.p Protein 3e-27 44
BN406_00972 YP_006839843.1 chloramphenicol O-acetyltransferase JF268688.1.gene6.p01 Protein 2e-27 41
BN406_00972 YP_006839843.1 chloramphenicol O-acetyltransferase AY123251.gene2.p01 Protein 8e-27 41