Gene Information

Name : yfeB (BN406_02883)
Accession : YP_006841754.1
Strain : Sinorhizobium meliloti Rm41
Genome accession: NC_018700
Putative virulence/resistance : Virulence
Product : Chelated iron transport system membrane protein YfeB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3001345 - 3002280 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCTTCAGGAAAAGGCCCGCGCCTATCCGGGAGCAGCTCCGCAAGAGGAGGATGGCGGCATTCGCGTCAGCGGCGC
TACGGTGACCTACCGCAACGGCCACCGGGCGCTGCGCGACGCCTCCTTCGAAATCCCGACGGGCACCATCGCGGCCCTTG
TCGGCGTCAACGGCAGCGGCAAGTCGACGCTGTTCAAAGCTATCATGGGCTTCGTCCGGCTGGCCAAGGGCGACATTTCG
ATCCTGGGCCTCACCGTGCCGCAGGCACTGAGACAGAACCTCGTCGCCTATGTCCCGCAGGCCGAAGAGGTCGACTGGAA
TTTTCCCGTCCTCGTCGAAGACGTGGTGATGATGGGCCGTTACGGCCATATGAACATGCTGCGCATCCCGAAAAAGGCCG
ATCACGAGGCGGTCGAGACGGCGCTGGCGCGGGTCGGCATGAGCGAGTTCCGCAAGCGCCAGATCGGCGAGCTTTCCGGC
GGTCAGAAGAAGCGGGTCTTCCTGGCCCGGGCGCTTGCCCAGAACGGCCGCGTCATCCTGCTCGACGAGCCTTTCACCGG
GGTCGACGTGAAAACGGAGGACGCGATCATCCGCCTGCTCGTCGCGCTTCGCGAAGAAGGCCGTGTGATGCTCGTCTCCA
CCCATAATCTCGGAAGCGTGCCGGAATTCTGCGACCGCACCATCCTTCTGAAAAATACGGTGCTCGCCTACGGTCCCACG
GAAACCACCTTCACCCGCGAAAACCTGGAGCTCGCCTTCGGGGGCGTCCTGCGTCACTTCGTGCTCGGCGGAGAGAACCT
CCATGACGATGCCGATCCACGCCAGCTCTCGGTCATCAGCGACGACGAGCGTCCGCTCGTCATGTATGGCGCCCGCGACC
GCATGGTTGCGCAGCCGGCCAAACCGGAATCGGAATCCGAGGCGGACTCCGAATGA

Protein sequence : 
MNLQEKARAYPGAAPQEEDGGIRVSGATVTYRNGHRALRDASFEIPTGTIAALVGVNGSGKSTLFKAIMGFVRLAKGDIS
ILGLTVPQALRQNLVAYVPQAEEVDWNFPVLVEDVVMMGRYGHMNMLRIPKKADHEAVETALARVGMSEFRKRQIGELSG
GQKKRVFLARALAQNGRVILLDEPFTGVDVKTEDAIIRLLVALREEGRVMLVSTHNLGSVPEFCDRTILLKNTVLAYGPT
ETTFTRENLELAFGGVLRHFVLGGENLHDDADPRQLSVISDDERPLVMYGARDRMVAQPAKPESESEADSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-91 71
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-91 71
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-90 70
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-90 70
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-90 70

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_006841754.1 Chelated iron transport system membrane protein YfeB BAC0350 Protein 4e-90 70
yfeB YP_006841754.1 Chelated iron transport system membrane protein YfeB BAC0440 Protein 7e-90 64
yfeB YP_006841754.1 Chelated iron transport system membrane protein YfeB BAC0400 Protein 6e-46 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_006841754.1 Chelated iron transport system membrane protein YfeB VFG0526 Protein 3e-90 70