Gene Information

Name : xerD (BN406_02539)
Accession : YP_006841410.1
Strain : Sinorhizobium meliloti Rm41
Genome accession: NC_018700
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2605447 - 2606382 bp
Length : 936 bp
Strand : +
Note : -

DNA sequence :
ATGACGGATATGTCCGCAGCCTACGTCGAAGCCTTCCTGGAAATGATGAGCGCCGAGCGTGGAGCGGCGGCGAACACGCT
GCAATCCTACGAGCGCGACCTCGAGGACGCGCGTTCCTTCCTGCGCTCGCGCGGCACCGGGCTCACCGACGCCTCGGCCG
ACGATCTCAGAAGCTATCTCTCCCATCTCGCAGGCCAGGGCTTCAAAGCGTCGTCGCAGGCGCGGCGGCTCTCGGCCCTC
CGGCAATTTTACAAGTTCCTCTATGCGGAGGGGCTGCGCACGGACGACCCGACGGGCATCCTCGACGCGCCGAAGAAAGC
CCGCACCCTTCCGAAGACCCTCAGCATCGAAGACGTCACCCGGCTGATCGGCCAGGCGGAAGCGGAGGCGAAATCCGGCA
GCGACGACGTGATGGCGAAATTGCGCATGCACGCGCTGATCGAGCTCCTTTATGCGACAGGCATGCGCGTCAGCGAGCTC
GTGTCGCTGCCGGCGAGCGTGCTTGCACAGAACGGGCGTTTTCTCATCATTCGCGGCAAGGGTAACAAGGAAAGGCTCGT
ACCGCTGTCGCAGGCGGCGATCCGCGCCATGCGGGCCTATGGGGAAGCACTGCAGGAAGAGAGTGCGGACAGCCCCTGGC
TGTTCCCCTCCAATGGCAAGTCCGGCCATCTGCCGCGGCAGGTCTTTGCCCGCGACCTCAAGAGCCTTGCGGCACGGGCA
GGCATCCGGGTGGCAGCGATTTCGCCGCACGTGCTGCGCCACGCCTTCGCCAGTCATCTGCTCGCCAACGGCGCCGACCT
TCGTGCCGTACAGGAACTGCTCGGCCATTCAGACATTTCCACGACACAAATCTATACGCATGTGCTGGAAGAACGGCTTC
ACGACCTCGTGCAAAACCATCACCCCCTTGCCAAACAGGCGAAAAAACAGGATTAG

Protein sequence :
MTDMSAAYVEAFLEMMSAERGAAANTLQSYERDLEDARSFLRSRGTGLTDASADDLRSYLSHLAGQGFKASSQARRLSAL
RQFYKFLYAEGLRTDDPTGILDAPKKARTLPKTLSIEDVTRLIGQAEAEAKSGSDDVMAKLRMHALIELLYATGMRVSEL
VSLPASVLAQNGRFLIIRGKGNKERLVPLSQAAIRAMRAYGEALQEESADSPWLFPSNGKSGHLPRQVFARDLKSLAARA
GIRVAAISPHVLRHAFASHLLANGADLRAVQELLGHSDISTTQIYTHVLEERLHDLVQNHHPLAKQAKKQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-43 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-43 42