|
Name : cmlA (BN406_02486) Accession : YP_006841357.1 Strain : Sinorhizobium meliloti Rm41 Genome accession: NC_018700 Putative virulence/resistance : Resistance Product : chloramphenicol resistance protein Function : - COG functional category : - COG ID : - EC number : - Position : 2555929 - 2557128 bp Length : 1200 bp Strand : + Note : - DNA sequence : ATGCCTACAAAAAACCATGTCTGGCGCTATTCGCTGCCGGCAGCGCTGCTGCTGATGGCGCCCTTCGATATCCTCGCCTC TCTGGCCATGGATATTTATCTCCCGATCGTTCCTGCGATGCCCGGTATTCTCGGCACCAGCCCTGCCGTGGTTCAGCTCA CGCTGAGCCTCTATATGGTTATGCTCGGCCTCGGCCAGATTGTCTTCGGGCCCGTCTCCGACCGCATCGGACGACGGCCA GTCCTGATCGGCGGAGCGATGCTGTTCGCCGCCGCATCGTTCTGCCTCGCGGCTTCCTCCAGCGCCATCCCTTTCGTCGC CTTCCGCTTCCTCCAGGCGGTTGGCGCATCTGCGGCTCTGGTGGCCACCTTTGCAACGATCCGGGATGTATATGCCGACC GCCCGGAAGGCGTGGTCATCTACAGCCTGTTCAGTTCCATTCTGGCATTCGTTCCCGCTCTGGGGCCGATAGCCGGTGCC ATGCTGGCGGAGAGGTTCGGATGGCGCTCGATCTTCGTTACGCTGGGTGCATTAGCCATAATCGCGCTGCTGCAGGCACT GCCTCGCTGGCATGAATCCCGCCCTTCGGCGGCAGCGCTGTCGCGGCACGCATTCGGCCCCCTTTTCCGCAGCCTCGCCT TCTGGACCTATACCCTCGGCTTCAGCGCCGCCATGGGCACGTTCTTCGTGTTCTTTTCCACCTCGCCGCGCGTGCTGATC GACAAGGCAGGATATTCGGAGCTGCAGTTCAGCCTCGCCTTTGCAACTGTAGCAATCGTGATGATCATCACGGCGCGCTT TGCCGAGCGGTTCGTCTCCCGATGGGGAACTTCGGGCAGCCTCCTGCGGGGCATGTGCATGTTGCTTCTCGGGGCAGCGC TCCTGATTGCCGGGGAAACGTTCGGCGTCCCTTCGTCCTGGACCTTCGTCATGCCGATGTGGGTGATGGCGGTCGGCATC GTCTTCACCGTATCGGTGACCGCAAACGGCGCTCTCGAGGATTTTGGAGACATGGCGGGTTCGGCGGTCGCAGTCTATTT CTGCGTCCAAAGCCTCATCGTCGGGACGGCGGGGACACTGCTCGTGATCGGACTGCCCGGCGACAGCGCGTGGCCGCTTG TCGTCTATGCCTCGATTATGGCCGGCGTTGTGCTGATCGCGCGCCGGCAGTTGCATTCCAGAAGGCATGTGCAGGCATGA Protein sequence : MPTKNHVWRYSLPAALLLMAPFDILASLAMDIYLPIVPAMPGILGTSPAVVQLTLSLYMVMLGLGQIVFGPVSDRIGRRP VLIGGAMLFAAASFCLAASSSAIPFVAFRFLQAVGASAALVATFATIRDVYADRPEGVVIYSLFSSILAFVPALGPIAGA MLAERFGWRSIFVTLGALAIIALLQALPRWHESRPSAAALSRHAFGPLFRSLAFWTYTLGFSAAMGTFFVFFSTSPRVLI DKAGYSELQFSLAFATVAIVMIITARFAERFVSRWGTSGSLLRGMCMLLLGAALLIAGETFGVPSSWTFVMPMWVMAVGI VFTVSVTANGALEDFGDMAGSAVAVYFCVQSLIVGTAGTLLVIGLPGDSAWPLVVYASIMAGVVLIARRQLHSRRHVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 3e-106 | 69 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 1e-107 | 68 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 1e-107 | 68 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 1e-107 | 68 |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 2e-107 | 67 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 2e-107 | 67 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 6e-80 | 50 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 3e-79 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cmlA | YP_006841357.1 | chloramphenicol resistance protein | NC_010410.6003586.p0 | Protein | 3e-80 | 50 |
| cmlA | YP_006841357.1 | chloramphenicol resistance protein | AF156486.gene.p01 | Protein | 3e-79 | 50 |
| cmlA | YP_006841357.1 | chloramphenicol resistance protein | DQ984668.gene.p01 | Protein | 3e-80 | 50 |
| cmlA | YP_006841357.1 | chloramphenicol resistance protein | AF294653.1.gene4.p01 | Protein | 2e-80 | 50 |
| cmlA | YP_006841357.1 | chloramphenicol resistance protein | DQ522237.1.gene4.p01 | Protein | 3e-80 | 50 |
