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Name : clpB (BN406_02466) Accession : YP_006841337.1 Strain : Sinorhizobium meliloti Rm41 Genome accession: NC_018700 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2533284 - 2535890 bp Length : 2607 bp Strand : - Note : - DNA sequence : ATGGATATCGAAAAATATTCGGAACGCGTCCGCGGTTTCCTGCAGTCGGCCCAGACCTATGCGCTGGCAGAAGGGCACCA GCAATTTACGCCGGAGCACGTTCTCAAGGTATTGCTCGACGACGATCAGGGCATGGCGGCTTCGCTTATCGAGCGCGCCG GCGGCAATGCGCGGGAAGCCAAGGTCGGTACGGCCGCAGCTTTGGCGAAGCTTCCGAAGGTGACCGGCGGCAACGGCTCG GTCTATCTGTCTCAGCCGCTCGCAAAGGTTTTCACCACAGCCGAAGATGCGGCCAAGAAGGCCGGCGACAGCTTCGTAAC CGTCGAACGCCTGCTCCTGGCGCTGGCGATCGAAAGCTCGGCCGCGACGGCGTCGATCCTCTCCAAGGCCGGCGTCACGC CGACGAAGCTCAACCAGGTCATCAACGAAATCCGCAAGGGCCGCACCGCCGACAGCGCCAATGCCGAACAAGGCTTCGAT TCGCTCAAGAAATATGCGCGCGATCTGACCGCCGAGGCGAGGGAAGGCAAGCTCGATCCGGTGATCGGCCGCGACGACGA GATTCGCCGAACGATCCAGGTGCTCTCGCGCCGGACGAAGAACAATCCCGTGCTGATCGGCGAGCCGGGCGTCGGCAAGA CCGCCATCGCGGAAGGTCTGGCGCTCAGGATCGTCAACGGCGATGTGCCTGAAAGCCTGAAGGACAAGCGCCTGATGGCG CTCGACATGGGCGCGCTGATCGCCGGTGCGAAGTTCCGCGGTGAATTCGAAGAGCGGCTCAAGGCCGTGCTGAACGAAGT GCGCTCGGAAGGTGGCGAGATCATCCTCTTCATCGATGAAATGCACACACTGGTCGGTGCAGGCAAGGCGGACGGGGCTA TGGATGCCTCGAACCTCCTGAAGCCCGCGCTTGCCCGCGGCGAACTGCACTGCGTCGGCGCGACGACGCTCGACGAATAC CGCAAGCATGTCGAGAAGGACGCAGCCCTTGCCCGCCGGTTCCAGCCGGTGATGGTCGAGGAACCGACGGTCGAGGATAC GATCTCGATCCTGCGCGGCCTGAAGGAAAAATACGAGCAGCACCACAAGGTGCGGATCTCCGATTCCGCGCTGGTTGCGG CTGCGGCACTTTCCAACCGCTACATCACCGATCGTTTCCTTCCGGACAAGGCGATCGACCTCATGGACGAGGCAGCCTCG CGCCTCAGGATGCAGGTCGATTCGAAGCCGGAAGAACTCGACGAACTCGACAGGCGCGTCATTCAACTGAAGATCGAACG TGAGGCCTTGAAAAAGGAGACCGACGTTTCCTCCAAGGATCGCCTTGCCAAGCTCGAACTCGATCTGTCTTCGCTCGAAG AGGAGGCAGCCGCATTGACGGCGCGCTGGCAGGCCGAGAAGCAGAAGCTCGGGCAGGCCGCCGATCTCAAGAAACAGCTC GACGAAGCGCGCAACGAGCTGCAGATCGCACAGCGCAAGGGCGAATTCCAGCGGGCAGGGGAGCTTGCCTACGGGGTGAT CCCGAATCTCGAAAAGGAACTGGCCGAAGCGGAAAGCCAGGATGGTGCCAGCGCCAACCCGATGGTGCAGGAGGTCGTGA CCCCTGACAACATCGCCCATATCGTGTCACGCTGGACCGGCATTCCGGTCGACAAGATGCTGGAAGGCGAGCGCGACAAG CTGCTCAGGATGGAAGACGAGCTGGCGAAATGGGTCGTCGGTCAGGGTGATGCCGTGCAGGCCGTCTCGCGGGCGGTTCG CCGTTCGCGCGCAGGGCTTCAGGATCCGAACCGGCCGATCGGCTCCTTCATCTTCCTGGGTCCGACCGGCGTCGGCAAGA CGGAGCTCACCAAGGCGCTTGCCCGCTTCCTCTTCGACGACGAAACCGCGCTGATGCGGATCGACATGTCCGAGTACATG GAGAAGCATTCGGTCGCGCGCCTGATCGGCGCGCCTCCCGGCTATGTCGGTTACGAGGAGGGTGGGGCGCTGACGGAATC GGTCCGCCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGATGTCTTCAACGTGCTTCTGC AGGTGCTTGACGATGGGCGTCTGACCGATGGTCAGGGGCGCACGGTCGACTTCAAGAACACGATGATCATCATGACCTCC AACCTCGGTGCGGAATACCTGACCGCACTCGGCGAAAACGAGGACAGCGATGCGGTTCGCGATCAGGTCATGGAAGTGGT GAGAGCCGCTTTCCGTCCGGAATTTCTGAACCGCGTCGACGAGATCATCCTCTTCCACCGGCTGCGCCGCTCGGAAATGG GCGCGATCGTCGACATTCAGCTCGAAAGGCTGCGCAAGCTCCTCTCGGATCGCAAGATCACGCTCGAGCTCGAGGACGAT GCCCGCGTTTTCCTGGCGGACAGGGGCTACGATCCGGCCTACGGCGCTCGCCCCCTGAAGCGGGCGATCCAGAAATACGT TCAGGACCCGCTGGCCGAAAAAGTGCTGCAGGGCGAGTTCCCGGATGGCTCGGTGATCAAGGTCGTTGCCGGTTCCGACC GTCTGAACTTCAAGCGCGGGGCAGGGGCGAACAAGGAAGCCGCGTAA Protein sequence : MDIEKYSERVRGFLQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAKVGTAAALAKLPKVTGGNGS VYLSQPLAKVFTTAEDAAKKAGDSFVTVERLLLALAIESSAATASILSKAGVTPTKLNQVINEIRKGRTADSANAEQGFD SLKKYARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMA LDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAAS RLRMQVDSKPEELDELDRRVIQLKIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQL DEARNELQIAQRKGEFQRAGELAYGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDK LLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYM EKHSVARLIGAPPGYVGYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTS NLGAEYLTALGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELEDD ARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEFPDGSVIKVVAGSDRLNFKRGAGANKEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-104 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006841337.1 | chaperone protein ClpB | VFG2076 | Protein | 5e-117 | 43 |
| clpB | YP_006841337.1 | chaperone protein ClpB | VFG2084 | Protein | 2e-104 | 42 |
