Gene Information

Name : phoB (BN406_00148)
Accession : YP_006839019.1
Strain : Sinorhizobium meliloti Rm41
Genome accession: NC_018700
Putative virulence/resistance : Virulence
Product : Phosphate regulon transcriptional regulatory protein phoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 158531 - 159214 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGCCGAAGATTGCCGTAGTCGAAGATGAGGAAGCCCTAAGCGTTCTCCTGCGCTACAATCTCGAGGCAGAAGGCTT
CGAGGTCGATACGATCCTTCGCGGCGACGAGGCGGAGATCCGCCTGCAGGAGCGCCTGCCCGACCTTCTCATCCTCGATT
GGATGCTGCCCGGGGTTTCCGGCATCGAGCTCTGCCGCAGGCTGCGCCAGCGGCCGGAAACGGAGCGCCTGCCGATCATC
ATGCTGACGGCGCGCGGCGAGGAGAGCGAGCGCGTGCGGGGCCTTGCCACCGGGGCCGACGATTACGTCGTCAAGCCCTT
CTCGACGCCGGAACTGATGGCGAGGGTCAAGGCTATGCTCAGGCGCGCCAAGCCCGAGGTTCTGTCGACGCTCCTGCGCT
GCGGCGATATCGAGCTCGACCGGGAGACGCACCGCGTCCACCGCCGCAGCCGCGAAGTGCGCCTCGGCCCGACGGAGTTC
CGGCTGCTGGAATTTCTCATGTCCTCACCGGGGCGCGTCTTCTCCCGTTCACAGCTCCTGGACGGTGTCTGGGGGCACGA
CATCTATGTCGACGAACGGACCGTGGACGTCCATGTCGGACGTCTGCGCAAGGCACTGAACTTCTCCAACATGCCCGACG
TCATCCGGACGGTGCGCGGCGCGGGCTATTCGCTGGAGAGCTGA

Protein sequence : 
MLPKIAVVEDEEALSVLLRYNLEAEGFEVDTILRGDEAEIRLQERLPDLLILDWMLPGVSGIELCRRLRQRPETERLPII
MLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLRRAKPEVLSTLLRCGDIELDRETHRVHRRSREVRLGPTEF
RLLEFLMSSPGRVFSRSQLLDGVWGHDIYVDERTVDVHVGRLRKALNFSNMPDVIRTVRGAGYSLES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-35 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-34 43
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 6e-27 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 6e-27 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 6e-27 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 6e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB HE999704.1.gene2815. Protein 4e-40 44
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB AE000516.2.gene3505. Protein 9e-34 44
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_002952.2859905.p0 Protein 1e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_002758.1121668.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_009641.5332272.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_013450.8614421.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_007793.3914279.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_003923.1003749.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_007622.3794472.p0 Protein 1e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_002745.1124361.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_009782.5559369.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_002951.3237708.p0 Protein 2e-41 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB CP001918.1.gene3444. Protein 1e-32 42
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_010410.6002989.p0 Protein 1e-35 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_010400.5986590.p0 Protein 1e-34 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_011595.7057856.p0 Protein 1e-35 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_012469.1.7685629. Protein 4e-36 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_002516.2.879194.p Protein 8e-27 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB CP000034.1.gene2186. Protein 6e-32 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB NC_002695.1.916589.p Protein 5e-32 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB CP000647.1.gene2531. Protein 7e-33 41
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB BAC0039 Protein 6e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB VFG1390 Protein 3e-36 45
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB VFG1563 Protein 5e-35 43
phoB YP_006839019.1 Phosphate regulon transcriptional regulatory protein phoB VFG1702 Protein 5e-35 43