Gene Information

Name : BN406_01312 (BN406_01312)
Accession : YP_006840183.1
Strain : Sinorhizobium meliloti Rm41
Genome accession: NC_018700
Putative virulence/resistance : Resistance
Product : major facilitator superfamily protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1354672 - 1355916 bp
Length : 1245 bp
Strand : +
Note : -

DNA sequence :
ATGCTCGACAAGAAATTCGTGAGACGCGGTCTGTTCCTCGTCTTCCTCATTCTCTTCCTCGACATCATGGGCATCGCGAT
CATCGTGCCGGTGTTGCCGGCCTATCTCGAGGAACTGACCGGCGCGGATATCGGCGAGGCCGCGGTCGACGGTGGATGGC
TGTTGCTCGTCTACTCGGCGATGCAGTTTCTCTTCGCACCGCTTATCGGGAATCTGAGCGATCGATTCGGGCGTCGGCCG
GTCCTGCTTGCGTCCGTGCTGACCTTTGCGCTCGACAACCTGATCTGCGCGCTTGCGACCAGCTATTGGATGCTCTTCAT
CGGGCGCAGCCTTGCCGGCATCAGCGGCGCGAGCTTCGGCACGGCATCCGCCTACATTGCCGATGTCAGCGACGATGAGA
ACCGCGCCAAGAACTTCGGGCTGATCGGCATTGCCTTCGGCACCGGTTTTGCGCTCGGCCCGGTCATCGGAGGCTTCCTC
GGCGAATTGGGCCCGAGAGTGCCCTTTTATGGTGCGGCAGCGCTTTCATTCCTCAATTTCATTATGGGGGTCTTTCTCCT
GCCCGAGACGCTCGCCCCGGCCAACCGGCGGCGCTTCGAATGGCACCGGGCAAACCCGCTCGGCGCGCTCAAGCAGATGC
GCCATTACCCGGGCATCGGCTGGGTAGGCCTCGTCTTCTTCCTCTACTGGCTGGCTCACGCCGTCTACCCGGCCGTCTGG
TCCTTCGTCGGCTCCTATCGCTACGGGTGGAGCGAAGGGCAGATCGGGCTTTCGCTGGGGATCTTCGGCGTCGGCGGCGC
AATCGTGATGGCGCTGGTGCTCCCGCGTGTCGTGCCGGCACTGGGAGAAAGGCGTACGGCGGCACTCGGGCTCACCTTCA
CGGCCCTCGGGATGGCGGGCTATGCGGCCGCCTGGGAGGGGTGGATGGTCTACGCGGTGATCGTCGCGACCGCGCTCGAA
AGCCTAGCCGACCCACCGCTCCGCAGCATAGCCTCCGTCCATGTCCCGCCGTCGGCACAGGGCGAGCTGCAAGGTGCGCT
CACCAGCATATCGAGCATTACGACGATCCTCGGACCTCTGATGTTCACGCAGATTTTCGCCTTTTTCACCGACCCTGCAG
CCGCCCATAGCTTTGCCGGCGCTCCCTATGCCCTGGCAGGCTGCTTGATCGTCGCCGCGCTGGTGATCTTCCTTGCCAAG
GTCGGCGCCGGCCGAGGCGCCGTCCGCGGTGCCGTGCGAGCGTGA

Protein sequence :
MLDKKFVRRGLFLVFLILFLDIMGIAIIVPVLPAYLEELTGADIGEAAVDGGWLLLVYSAMQFLFAPLIGNLSDRFGRRP
VLLASVLTFALDNLICALATSYWMLFIGRSLAGISGASFGTASAYIADVSDDENRAKNFGLIGIAFGTGFALGPVIGGFL
GELGPRVPFYGAAALSFLNFIMGVFLLPETLAPANRRRFEWHRANPLGALKQMRHYPGIGWVGLVFFLYWLAHAVYPAVW
SFVGSYRYGWSEGQIGLSLGIFGVGGAIVMALVLPRVVPALGERRTAALGLTFTALGMAGYAAAWEGWMVYAVIVATALE
SLADPPLRSIASVHVPPSAQGELQGALTSISSITTILGPLMFTQIFAFFTDPAAAHSFAGAPYALAGCLIVAALVIFLAK
VGAGRGAVRGAVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 2e-49 41
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 2e-49 41
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 2e-49 41
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 3e-49 41
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 2e-49 41
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 1e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN406_01312 YP_006840183.1 major facilitator superfamily protein NC_011586.7045189.p0 Protein 2e-47 41
BN406_01312 YP_006840183.1 major facilitator superfamily protein AY264780.2.gene3.p01 Protein 6e-48 41
BN406_01312 YP_006840183.1 major facilitator superfamily protein NC_010410.6002597.p0 Protein 9e-50 41
BN406_01312 YP_006840183.1 major facilitator superfamily protein CP001485.1.gene2821. Protein 9e-50 41
BN406_01312 YP_006840183.1 major facilitator superfamily protein AF534183.gene.p01 Protein 8e-50 41